Gene Nham_2344 details

Gene Information

• Locus tag: Nham_2344
• Symbol: pdxA
• ID: 4032014
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 2611562
• End bp: 2612569
• Gene Length: 1008 bp
• Protein Length: 335 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637970805
• Product: 4-hydroxythreonine-4-phosphate dehydrogenase
• Protein accession: YP_577596
• Protein GI: 92117867
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1995] Pyridoxal phosphate biosynthesis protein
• TIGRFAM ID: [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTGAGGC CTGTTGCACT GACCCTGGGT GAGCCGGCCG GCATCGGACC GGATATCGCG 
ATCGCGGCGT GGCTGCGACG CGAAAGTGAT GCCGTGCCGC CTTTCTATCT CCTCGGCGAC 
CGCGCCTTTA TCGCAGCCCG CGCCAAACTG CTTGGTGTTG ATCTTCCTCT GGCCGACGCC 
GACCCCGGCG ATGTCTCCGG GATATTCACG GAAGCGCTTC CGATTGTTCC CACCGGCCAT 
CCGACAACCG CGCGTCCCGG TCATCCCGAT CACAACAGCG CTGCGGCAGT GATCGGATCC 
ATCCGTCAGG CGGTCAACGA CGTTGTTGCC GGACATGCGG CCGCGCTCGT CACCAATCCG 
ATTGCAAAGA GCGTGCTGTA CCGTGCCGGA TTCGCTCACC CCGGCCATAC CGAATTTCTC 
GCCGAACTGG CGGCGACAAA CGGCCAACCG CCGCAACCGG TGATGTTGCT GTGGTCGTCC 
GATCTGGCGG TGGTGCCGGT CACGATCCAT CTTCCCCTGC GCGAGGCGAT CACGACGCTA 
TCGAGCCGGA TGATCGTGGA CACCACGCGC ATCGTCGTTG CCGGCCTGCG CACGCGCTTC 
GGGATTCCCC GCCCCCGTAT AGCGGTATCC GGATTGAACC CTCATGCCGG AGAGGATGGA 
TCGCTCGGAA CCGAGGATCA GACAATCGTC GCTCCGGCCA TCGCAACCCT GCGCGCTGAG 
GGGATCGACG TCAAAGGCCC GCTTCCCGCC GACACCATGT TCCATGAGGC CGCGCGCCGG 
ACCTATGATT GCGCGATCTG CATGTATCAC GATCAGGCCC TGATCCCGGT CAAGACGCTG 
GCCTTCGATC GAGCGGTCAA CGTCACGCTG GGGCTGCCGT TTATCCGGAC ATCGCCCGAT 
CACGGCACCG CATTCGACAT CGCCGGTACG GGACGCGCCA ATCCGTCGAG TCTGATCGCC 
GCGCTGCGCC TGGCCGCGCG GATGGCGGAC TCAACGCATT TGGCATGA 

 

Protein sequence

MVRPVALTLG EPAGIGPDIA IAAWLRRESD AVPPFYLLGD RAFIAARAKL LGVDLPLADA 
DPGDVSGIFT EALPIVPTGH PTTARPGHPD HNSAAAVIGS IRQAVNDVVA GHAAALVTNP 
IAKSVLYRAG FAHPGHTEFL AELAATNGQP PQPVMLLWSS DLAVVPVTIH LPLREAITTL 
SSRMIVDTTR IVVAGLRTRF GIPRPRIAVS GLNPHAGEDG SLGTEDQTIV APAIATLRAE 
GIDVKGPLPA DTMFHEAARR TYDCAICMYH DQALIPVKTL AFDRAVNVTL GLPFIRTSPD 
HGTAFDIAGT GRANPSSLIA ALRLAARMAD STHLA