| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2300 |
|---|
| Symbol | |
|---|
| ID | 4032532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 2554943 |
|---|
| End bp | 2556043 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637970761 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_577552 |
|---|
| Protein GI | 92117823 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1509] Lysine 2,3-aminomutase |
|---|
| TIGRFAM ID | [TIGR00238] KamA family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.286942 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTCA GGACCAACAG AAGCGTCGTT TCGACATTGC GCCAGCCGGA GGACCTGATT
GCCCATGGCC TCGCGCCGGC CGCGGCTCTG CCCGATCTCG CCAGGGTTGC CGCGCGCTAT
GCGATCGCGG TCACGCCGGA GGTGGCCAGC CTGATCGATC CCGACGATCC CGACGATCCG
ATCGCGCGAC AATATCTCCC GAGTGTCGAT GAGCTGGCGG CGCAGCCCGG CGAGCGCGCC
GATCCGATCG GCGATCGCGC GCATTCACCG GTGGACGGAA TCGTCCACCG TTATCCCGAC
CGGGTTCTGC TCAAGCTCGT TCATGTCTGC GCGGTCTATT GCCGGTTTTG CTTCCGTCGT
GAGATGGTAG GGCCCGCCAA GGAAACCGCG CTGTCGAAAT CCGCGGCCAC GGCCGCGCTC
GATTACATCC GCTCGCATCC GGAAGTCTGG GAAGTGATCC TGACCGGCGG CGACCCGCTG
ATGCTGTCGC CGCGGCGGCT GGCCGAGATC ATGGCCGAGC TTGCCGGGAT CGGTCACGTC
AAGATCGTCC GCATCCATAG CCGCGTGCCG GTCGCCGATC CCACGCGAGT CAGCGACGAG
ATGGTGGCGG CCTTGAAAGC GGCGGGCGCC ACCACCTGGC TGGCGCTGCA CGCCAATCAT
CCCCGCGAAC TGACCGCCGC GGCGCGCTCG GCCTGCGCGC GGATCGTCGA TGCCGGTATT
CCCATGGTCA GCCAGTCGGT GCTGCTGCGC GGCGTCAACG ATGACGCGGC GACGCTGGAA
GCGCTGATGC GCGCCTTCGT CGAATGCCGC ATCAAGCCGT ACTATCTGCA CCACGGCGAC
CTCGCGCCGG GCACGGCGCA TCTGCGGACC ACGCTGGAGC AGGGCCGGGC GCTGATGCGC
GCACTGCGAG GCCGTGTGTC CGGACTGTGC CAGCCGGATT ATGTTCTCGA TATTCCGGGC
GGATACGGCA AGTCGCCGGT GGGGCCGGAC TATCTGTCGC AGTCAGATTT AACCTTCGGA
GAAGGTGAAC ATCGGCCGGA ATCGCGTTAT CGTATCGTCG ACTATTGCGG CGGCGTTCAC
CTCTATCCGC CGAAGCTCTA G
|
|---|
| Protein sequence | MSVRTNRSVV STLRQPEDLI AHGLAPAAAL PDLARVAARY AIAVTPEVAS LIDPDDPDDP
IARQYLPSVD ELAAQPGERA DPIGDRAHSP VDGIVHRYPD RVLLKLVHVC AVYCRFCFRR
EMVGPAKETA LSKSAATAAL DYIRSHPEVW EVILTGGDPL MLSPRRLAEI MAELAGIGHV
KIVRIHSRVP VADPTRVSDE MVAALKAAGA TTWLALHANH PRELTAAARS ACARIVDAGI
PMVSQSVLLR GVNDDAATLE ALMRAFVECR IKPYYLHHGD LAPGTAHLRT TLEQGRALMR
ALRGRVSGLC QPDYVLDIPG GYGKSPVGPD YLSQSDLTFG EGEHRPESRY RIVDYCGGVH
LYPPKL
|
|---|
| |