Gene Nham_2279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2279 
Symbol 
ID4032549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp2532335 
End bp2532841 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content66% 
IMG OID637970740 
ProductHolliday junction resolvase-like protein 
Protein accessionYP_577531 
Protein GI92117802 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.273152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATGCG AAGCCATGCC CGCATCAGTC CTCCCGTTGA TCGAAGCCGC CGCGCACTGG 
CCTGAACGCG GCGCCCTCGT CGGACTCGAT CTCGGCACCA AGACCATCGG TGTCGCGGTG 
TCCGATCCGG ATCGCCGCCT CGCCACCGGC GTCGAGACGC TTCAGCGCAA GACGTTTACG 
GCAGATGCCG CGCGGCTGCT CGCCATCGCG GGCGAACGCA ATGCGGCAGG TTTCGTTCTT 
GGACTGCCGA TCAACATGGA CGGCAGCGAA GGACCGCGCG CGCAATCGAC CCGTGCCTTT 
GCTCGCAATC TGGCAAGACT CACCGATCTC GCCATCGGGC TGTGGGACGA GCGGCTATCG 
ACGGTCGCCG TCGAGCGCGA GCTGATCGGC ATGGACATGA GCCGCGCAAA GCGCGCCAAG 
GTCATCGACG AGCACGCCGC GATCTTCATC CTGCAGGGCG CACTCGACCG GCTTGCGGTG 
CTGCGGCGGA CCTCAAAGGC GAACTGA
 
Protein sequence
MICEAMPASV LPLIEAAAHW PERGALVGLD LGTKTIGVAV SDPDRRLATG VETLQRKTFT 
ADAARLLAIA GERNAAGFVL GLPINMDGSE GPRAQSTRAF ARNLARLTDL AIGLWDERLS 
TVAVERELIG MDMSRAKRAK VIDEHAAIFI LQGALDRLAV LRRTSKAN