Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2261 |
Symbol | mscL |
ID | 4033184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 2512541 |
End bp | 2512960 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637970721 |
Product | large-conductance mechanosensitive channel |
Protein accession | YP_577513 |
Protein GI | 92117784 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1970] Large-conductance mechanosensitive channel |
TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAAGG AATTTCGTGA ATTTGCGATG AAGGGCAATG TCGTCGATCT CGCGGTCGCC GTCATCATCG GCGCCGCGTT CGGGGCCATC GTCTCCTCGA TGGTGGCCGA CGTCATTATG CCGATCATTG GCGCTGTCAC CGGCGGCCTC GACTTTTCCA ACTATTTCAC CGGTCTTTCG AAGACCGTTA CCGCGACCAA CCTTGCGGAC GCGAAAAAGC AGGGCGCGGT GCTGGCGTGG GGCAATTTCC TGACGCTGAC GCTGAACTTC CTGATCGTGG CCTTCGTGCT GTTCATGGTG GTTCGCTTCA TGAGCAAGCT GAAGCGCAAG GATGAGGCAG CACCCGCGGC GCCGCCGAAG CCGACCCGCG AGGAAGAACT GCTGACAGAA ATCCGCGATC TCCTGAAAAC GAAGAAATAG
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Protein sequence | MLKEFREFAM KGNVVDLAVA VIIGAAFGAI VSSMVADVIM PIIGAVTGGL DFSNYFTGLS KTVTATNLAD AKKQGAVLAW GNFLTLTLNF LIVAFVLFMV VRFMSKLKRK DEAAPAAPPK PTREEELLTE IRDLLKTKK
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