| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2228 |
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| Symbol | clpX |
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| ID | 4030019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 2478647 |
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| End bp | 2479921 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637970687 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_577480 |
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| Protein GI | 92117751 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.127466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGG TCGGTACGGG CGACTCCAAG AACACGCTGT ATTGTTCGTT TTGCGGCAAG
AGTCAGCACG AAGTACGCAA GCTGATTGCG GGGCCCACCG TATTTATCTG TGACGAATGC
GTTGAACTCT GCATGGATAT CATTCGCGAG GAGAACAAAT CCTCGCTGGT GAAATCGCGC
GACGGCATTC CGACCCCGAA GGAAATCTGC AAGGTCCTGG ACGACTACGT CATCGGGCAA
GGCCATGCCA AGAAGGTGCT CTCGGTCGCG GTCCACAATC ACTACAAGCG GCTCAATCAT
CAGACCAAGC ACAACGACGT CGAACTCGCG AAGTCGAACA TCCTGCTGAT CGGCCCGACC
GGGTCCGGCA AGACGCTGCT TGCGCAGACG CTGGCGCGGA TCCTCGATGT TCCGTTTACG
ATGGCGGATG CGACGACGCT GACCGAAGCC GGCTATGTCG GCGAGGATGT CGAAAATATC
ATTCTGAAGC TGTTGCAGTC CGCGGACTAT AATGTCGAGC GTGCGCAGCG CGGTATCGTC
TATATCGACG AGATCGATAA GATTTCGCGC AAGTCCGACA ATCCCTCGAT CACGCGTGAT
GTATCGGGCG AGGGCGTGCA GCAGGCATTG TTGAAGATCA TGGAAGGCAC GGTTGCGAGC
GTGCCGCCGC AGGGAGGGCG CAAGCACCCG CAGCAGGAGT TCCTGCAGGT CGATACGACG
AATATTCTGT TCATCTGCGG CGGCGCGTTC TCCGGTCTCG AGAAGATCAT CTCCGCGCGC
GGGCGGACCA CGTCGATCGG TTTCGCCGCG CAGGTGCTCG CACCGGAAGA TCGCCGCACC
GGTGAAATCT TCAGGCATGT CGAGCCGGAG GATTTGCTGA AGTACGGCCT CATCCCGGAA
TTCGTCGGGC GTCTGCCCGT CGTCGCTACG CTCGAGGATC TCGACGAGGC GTCGCTGAAG
AAGATCCTGA CCGACCCGAA GAATGCGCTG GTGAAACAGT ATCAGCGGCT GTTCGAGATG
GAGAACATCG AACTGACGTT CGCCGACGAG GCGCTGGGTG CGATCGCACG CAAGGCGATC
GAGCGCAAGA CCGGCGCGCG CGGGTTGCGT TCGATTCTCG AGAGCATCCT GCTCGAGACC
ATGTTCGATC TTCCGGGTCT GGAAGGGGTC GAGGAGGTCG TGATCTCGCG CGAAGTGGTT
GAGGGAACCG CGCGGCCGCT GTACATTTAC GCCGATCGCT CGGATCGCGC GAGCGAGACC
AGCGCCAGCG CCTGA
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| Protein sequence | MSKVGTGDSK NTLYCSFCGK SQHEVRKLIA GPTVFICDEC VELCMDIIRE ENKSSLVKSR
DGIPTPKEIC KVLDDYVIGQ GHAKKVLSVA VHNHYKRLNH QTKHNDVELA KSNILLIGPT
GSGKTLLAQT LARILDVPFT MADATTLTEA GYVGEDVENI ILKLLQSADY NVERAQRGIV
YIDEIDKISR KSDNPSITRD VSGEGVQQAL LKIMEGTVAS VPPQGGRKHP QQEFLQVDTT
NILFICGGAF SGLEKIISAR GRTTSIGFAA QVLAPEDRRT GEIFRHVEPE DLLKYGLIPE
FVGRLPVVAT LEDLDEASLK KILTDPKNAL VKQYQRLFEM ENIELTFADE ALGAIARKAI
ERKTGARGLR SILESILLET MFDLPGLEGV EEVVISREVV EGTARPLYIY ADRSDRASET
SASA
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