Gene Nham_2208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2208 
Symbol 
ID4032045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2456829 
End bp2458337 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content60% 
IMG OID637970665 
ProductNADH dehydrogenase subunit M 
Protein accessionYP_577460 
Protein GI92117731 
COG category[C] Energy production and conversion 
COG ID[COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) 
TIGRFAM ID[TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACCT GGCCGATCCT CTCCGTTGTG ACCTTCCTGC CGCTGCTCGG CGCGCTGCTG 
ATCTGGCTAC TGGCGCGAGG CAGTGATGAT GCCGCGGACA GGACCGCGCG CTGGATTGCG
TTATGGACCA CCGTCGTCAC CTTTGCGGTG TCGCTGATTC TGGTCGCGCG CTTCGATCCC
GCCGATCCCG GGTTTCAGTT TGTCGAACAC GCGAGCTGGC TTACGACCGG TATTCGCTAT
CACATGGGCG TGGACGGCAT CTCGCTGCCG TTGCTGATCC TGACTACAGC GTTGATGCCG
GTCTGCATTA TCGCGAGCTG GCGGGCGATC TCGCGCCGGG TGCCGGCCTA CATGATAGCG
TTTCTTGTGC TGGAAACGCT GATGGTCGGC ACGTTCTCGG CGCTCGACCT GTTGTTGTTC
TATGTATTCT TCGAAGGCGT TTTGATTCCG ATGTTCCTGA TCATCGGGAT CTGGGGCGGC
CCGCGCCGCG TCTATGCCAC CTTCAAGTTT TTCCTCTATA CGCTGCTCGG CTCGGTGCTG
ATGCTACTGG CCATCATGGC GCTCTACTGG AACGCCGGCA CCACCGACAT TCCCACGTTG
ATGCGGACCG CTGTTCCGTA CAATTTGCAG ATGTGGGCGT GGCTCGCCTT CTTTGCATCG
TTTGCGGTCA AGATGCCGAT GTGGCCCGTT CATACCTGGC TTCCGGATGC GCATGTCGAG
GCTCCGACGG CGGGCTCGGT GATTCTTGCA GCGATCCTGC TGAAGATGGG CGGCTACGGC
TTCCTGCGCT TCTCGCTGCC GATGTTCCCT TTGGCGTCGC ATGATTTCGC GCCGCTGATT
TTTGTGCTCT CGGCCATCGC GATCATCTAC ACCTCGCTGG TCGCGCTGAT GCAGGACGAC
ATGAAGAAGC TGATCGCCTA TTCGTCGGTC GCGCACATGG GCTTTGTGAC GATGGGCATC
TTCGCGGGCA CCATGCAGGG GGTCCACGGC GGCGTATTCC AGATGATCTC GCACGGTATC
GTGTCGGGTG CGTTGTTCCT CTGTGTCGGC ATTATTTACG ACCGTATGCA CACCCGCGAG
ATCGCGGCTT ATGGCGGCCT CGTCAATCGG ATGCCGCTCT ACGCGCTGGT GTTCATGACG
TTCACCATGG CCAACGTCGG GCTGCCCGGC ACCTCCGGTT TCGTCGGTGA ATTCCTGTCG
CTGATCGGCA CCTTCAAGGT ATCGATACCG ACGGCGTTCG CGGCGACGAC GGGCATAATC
CTGTCGGCGG CCTACGCCCT GTGGCTCTAT CGCAAGATCG TGTTCGGGGC GCTGGTCAAG
CCGTCGCTTG CGACGATCAA GGATCTGACG GTCCGCGAAT GCCTCACCTT GATGCCGCTG
TTTGTGCTGA CGATCCTGTT CGGCGTGTAT CCGAAGCCGG TGCTCGATCT CTCGGCGGCT
TCCGTGCAAA ATCTCGTCAA TAATTATGCA AGCGCGACCG CCGCCATCAA GGCGGCGGCG
CTGCCGTGA
 
Protein sequence
MTTWPILSVV TFLPLLGALL IWLLARGSDD AADRTARWIA LWTTVVTFAV SLILVARFDP 
ADPGFQFVEH ASWLTTGIRY HMGVDGISLP LLILTTALMP VCIIASWRAI SRRVPAYMIA
FLVLETLMVG TFSALDLLLF YVFFEGVLIP MFLIIGIWGG PRRVYATFKF FLYTLLGSVL
MLLAIMALYW NAGTTDIPTL MRTAVPYNLQ MWAWLAFFAS FAVKMPMWPV HTWLPDAHVE
APTAGSVILA AILLKMGGYG FLRFSLPMFP LASHDFAPLI FVLSAIAIIY TSLVALMQDD
MKKLIAYSSV AHMGFVTMGI FAGTMQGVHG GVFQMISHGI VSGALFLCVG IIYDRMHTRE
IAAYGGLVNR MPLYALVFMT FTMANVGLPG TSGFVGEFLS LIGTFKVSIP TAFAATTGII
LSAAYALWLY RKIVFGALVK PSLATIKDLT VRECLTLMPL FVLTILFGVY PKPVLDLSAA
SVQNLVNNYA SATAAIKAAA LP