| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2201 |
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| Symbol | |
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| ID | 4032038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 2448831 |
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| End bp | 2451041 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637970658 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_577453 |
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| Protein GI | 92117724 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.407628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAACC ACCTCGCCCC CGGCGGAGGT AGCGCGCTTT GGGGCGTGCT CGCGACAACA
GTGGCGATCC TATTGCCTTC TTCGGCTTTC GCGCAGTCGA GTTCCGGAAC CACGCTGCCG
ACGGTGACCG TAACGGCGCC GAAATCCAGC AAACCTCAAC CGAAGCGTGC GACGCGCAAC
GCGGCCCGGT CGAATCAGGC TCCGCGCCAT GCGCGGGTAC CGTCGCAGGC CGCTGTCGCT
GTTCCGGCGG CCGTCCCGGG ATCGTTGACT GTCGCGACCG CACAGCAGGC GCTGCGGGAG
ATCCAGCAGA CGCCCGGCGG CGTCGCGCTG GTGACGGCCG ACGCCTACAG GAATTCGACG
GTCTCCAGCA CCATCAAGGA TATACTCGAT TACGTGCCGG GCGTGTTCGC CCAGCCGAAA
TGGGGCGACG ACACCCGGCT GTCGATCCGC GGTTCGAGCC TGTCGCGCAA CTTCCATTTG
CGCGGTGTGC AGCTCTATAT GGACGGAATC CCGATCAACA CCGCCGACGG TTACGGTGAT
TTTCAGGAAA TCGACCCGAC CGCCTACAAG TACGTCGAGG TCTTCAAGGG CGGCAACGCG
CTGCGCTTCG GCGCCAATTC GCTCGGCGGC GCCATCAATT TCGTGACGCC GTCCGGCCGC
GATCCGTTCG TCAATGGCGT CAGCGTCGAT GCCGGCGCAT TCGGCTTTCG GCGGTTGCAA
GCCAATACCG GCGGCAGCAA CGGCCCGTGG GATGGTTTCG TCACCGCATC GACGCAGAGC
AGCGACGGGT TTCGCGATCA CAGCTACGGC CACTCGACCC GCGTCAGCGG CAATGTCGGG
TATCAGTTCT CGCCGGATTT CGAGACGCGG TTTTATCTCA ACGCCAATGA TGTGCGGCAA
CGCATTCCCG GCACCGTCAG CAAGGATTCA GCGCTGACGT CGCCTCAGAC CGCCGCCGCC
GGCAATATCG CACTCGACCA GCAGCGCAAT ATCGACACCG TGCGGATCGG CAACAAGACC
ACGATGCGGT TCGACAATAC GACGGTGGAG TTCGGCGCGT TCGGGGTCGA TCGGCATCTG
ATGCACCCGA TCTTCCAATG GCTCGATTAT CGCTATCAGG ACTATGGCGG GTTCGCGCGG
GTTACCGACG ATCGTGTGAT CGGCGGTTTT CGTAACCGGC TGGTGGCGGG CGTCAACCTG
CTCAATGGCC GGATCGACAA TCAACAATTC GAGAATCTCG CCGGCCAGAA AGGCGCGCTG
AAGTCGTCGT CGATCGACAG CTCGAGGAAC ACATCGGTCT ATGTCGAGGA TTCGTTCTAT
TTCCTGCCGA ATGTGGCGGC TGTCGCCGGC ACGCAGTTTC TCTACGCGAC GCGCAACAGG
CAGGACCGCT TTCTGAGCGA CGGCGATCAA TCGGGCCGAA CGGAGTTCAA CCTGTGGAGC
CCGAAGGGCG GGCTGTTGTG GCAGATCGAT CCGACCTGGC AGGCCTACGC CAACGTCTCT
CGCAGCGCCG AGGTGCCGAG CTTCGGCGAG AGTGCGATGG GCGTCGGGAT TCCGACGATT
CCGTTCACCA GCATTCGTCC TCAAACCGCG ACCACCTATG AGATCGGCAC GCGCGGCAAA
CGTCCGGATT TCACCTGGGA ACTGACGGCG TATCGCGCCC AGATCAGGAA TGAGTTGCTC
TGTTTCTATA GTGTGTTCGG CAACTGCAAC GTCACCAACG CCGACCGCAC CATGCATCAA
GGCATCGAAG CCGGAGCAGG CGCTGCGATC GTTCGCAACC TGTTCGTGCG CGGCGATCGA
CCGGACCGGC TCTGGCTGAA CGTCGCCTAT ACGTTCAACG ATTTCCGCTT CGACAACGAT
TCCGTGTTCG GCAACAACCT GCTGCCCGGC GCGCCACGGC ACTTCGTCCG CGCCGAACTG
CTCTACAAGC ATCCGAACGG GTTCTACATC GGCCCGAATC TCGAATGGGT GCCGCAGGGT
TATTATGCCG ACAGCGCCAA CACGCTGAGC ACCGATGCTT ACGCCATTTA TGGACTGAAG
GCGGGGTTTG ACGATGGCGG CAGGTATTCC GGCTATATCG AGGCCCGCAA CATCGGCAAC
AAGGCCTATA TCGCCTCCAG TTCGATCATC GATCGCGCCA ATGCCGCTTC ACCATTGTTT
GAACCCGGAA CCGGACGTGC GGTCTATGCT GGATTCAAAG TCCGATGGTG A
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| Protein sequence | MFNHLAPGGG SALWGVLATT VAILLPSSAF AQSSSGTTLP TVTVTAPKSS KPQPKRATRN
AARSNQAPRH ARVPSQAAVA VPAAVPGSLT VATAQQALRE IQQTPGGVAL VTADAYRNST
VSSTIKDILD YVPGVFAQPK WGDDTRLSIR GSSLSRNFHL RGVQLYMDGI PINTADGYGD
FQEIDPTAYK YVEVFKGGNA LRFGANSLGG AINFVTPSGR DPFVNGVSVD AGAFGFRRLQ
ANTGGSNGPW DGFVTASTQS SDGFRDHSYG HSTRVSGNVG YQFSPDFETR FYLNANDVRQ
RIPGTVSKDS ALTSPQTAAA GNIALDQQRN IDTVRIGNKT TMRFDNTTVE FGAFGVDRHL
MHPIFQWLDY RYQDYGGFAR VTDDRVIGGF RNRLVAGVNL LNGRIDNQQF ENLAGQKGAL
KSSSIDSSRN TSVYVEDSFY FLPNVAAVAG TQFLYATRNR QDRFLSDGDQ SGRTEFNLWS
PKGGLLWQID PTWQAYANVS RSAEVPSFGE SAMGVGIPTI PFTSIRPQTA TTYEIGTRGK
RPDFTWELTA YRAQIRNELL CFYSVFGNCN VTNADRTMHQ GIEAGAGAAI VRNLFVRGDR
PDRLWLNVAY TFNDFRFDND SVFGNNLLPG APRHFVRAEL LYKHPNGFYI GPNLEWVPQG
YYADSANTLS TDAYAIYGLK AGFDDGGRYS GYIEARNIGN KAYIASSSII DRANAASPLF
EPGTGRAVYA GFKVRW
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