Gene Nham_2187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2187 
Symbol 
ID4032683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2435440 
End bp2435910 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content62% 
IMG OID637970644 
Product3-dehydroquinate dehydratase 
Protein accessionYP_577439 
Protein GI92117710 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.379626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGGA CGATTTACGT GCTCAACGGC CCGAACCTTA ACATGCTCGG GACTCGGGAG 
CCGGAAACCT ATGGCCGCGC CACCCTGGCG GACGTCGAAA AGCTCTGCGC CGACACGGCC
GGGGATTTTG GACTGGCCGC GGATTGCCGC CAGTCCAATC GCGAGGGCGA ACTGATCGAC
TTCATCCACG ACGCCCATGC GAAGAAGGCG GCCGGCATCG TCATCAACGC CGGCGGCTAC
TCGCACACCT CGGTTGCGCT TCACGATGCG CTGGTCGCGG TGAATATCCC GACCGTCGAG
GTTCACATCA GCAATATCCA TGCGCGCGAG GACTTCCGCC ATCACTCGTT CACGGCCAGA
GCCGCTTTTG CGAGCCTCTG CGGGTTCGGA ATTGATGGCT ACCGGCTCGC CATCAACGGT
CTTGCCGCCA AAATCGGCGC GGTGAAGTCC GGCGCAAAAG TCAAATCCTG A
 
Protein sequence
MARTIYVLNG PNLNMLGTRE PETYGRATLA DVEKLCADTA GDFGLAADCR QSNREGELID 
FIHDAHAKKA AGIVINAGGY SHTSVALHDA LVAVNIPTVE VHISNIHARE DFRHHSFTAR
AAFASLCGFG IDGYRLAING LAAKIGAVKS GAKVKS