| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2124 |
|---|
| Symbol | |
|---|
| ID | 4031054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 2367133 |
|---|
| End bp | 2369133 |
|---|
| Gene Length | 2001 bp |
|---|
| Protein Length | 666 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637970582 |
|---|
| Product | carbamoyl-phosphate synthase L chain, ATP-binding |
|---|
| Protein accession | YP_577381 |
|---|
| Protein GI | 92117652 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.494302 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGC GTCCGCAGTA TCGCCGTTTC CAGACGCTCC TGATCGCCAA TCGCGGCGAG
ATCGCCTGCC GCGTGATCCG TTCCGCGCGC GCTATGGGCC TGCGCACCGT GGCCGTCTAT
TCGGAGGCCG ATCGCGACGC GCTGCATGTC GGCATGGCCG ACGACGCCGT GCTGCTTGGA
CCTGCGCCTG CCCGCGACAG CTATCTCGAT ATCGACAAGG TGATTGCTGC CGCCCGCCGG
ACCGGCGCGG AAGGCATCCA TCCCGGCTAT GGATTTTTGT CCGAGAATGC CGCCTTCGCA
CAGGCCTGCG CCGACGCCGA CCTCGTGTTC GTCGGGCCGA CTGCTGCCAT GATGACGGCC
ATGGGCTCGA AGTCGTGCGC CAAGGCGCTG ATGGAAAAGG CGGGTGTGCC GCTGGTGGCG
GGCTATCACG GCGAGGCGCA GGACGACGCC ACGCTGCAAG GCGCGGCAGA TCGGATCGGC
TATCCGGTGC TGGTGAAGGC ATCGGCCGGC GGCGGCGGCC GCGGTATGCG GATCGTGCGT
TCGGCCGCGG AATTGGCCCC GGCCGTCGTC AGCGCCAGGC GCGAGGCCAA GGCGGCGTTC
GGCGACGACC GGATGCTGAT CGAAAAATAC GTCGACAATC CCCGGCATAT CGAGGTGCAG
GTGATCGGCG ACAGCCACGG CAATCTGCTG TCGCTGTTCG AGCGCGAATG TACCCTGCAG
CGGCGGCACC AGAAGGTGAT TGAAGAGGCG CCCTCGCCGA CGCTCGATGC AGCGGGACGC
GAGGCCGTCT GCGCAGCTGC GCGCAAGGCG GCCGGCGCGG TGAATTATGT CGGCGCGGGC
ACCGTCGAGT TCGTGTCCGA CGGCAAGGAC GTGTTCTTCA TTGAAATGAA TACGCGCCTG
CAAGTCGAGC ATCCCGTGAC CGAGCTTGTC ACCGGCGTCG ATCTCGTCGA ATGGCAATTG
CGTGTCGCGT TCGGCGAAAA ACTGCCGCTG ACGCAGGACC AGATCAGGCT GAACGGCCAC
GCGATTGAAG CGCGCGTCTA CGCCGAAAAC CCGAACAAGA ATTTCATGCC GTCGGTCGGC
CGCATCAGGA CGTGGCGGAC GCCGCCCGAG GTCGACGGCT TGCGTATCGA TTCCGGCTAC
CGCGAGGGCG ATATGGTCTC GCCGAACTAC GACGCCATGC TCGCCAAGGT GATTGCCTGG
GCGCCGACCC GCGAGGCCGC GATCAGCCGG CTCGACCGCT CCCTGCAAGA GACCGATGTC
CGCGGCGTCG TCACCAACAT TCCGTTCCTG TCCGCGCTGG TGATGCACCC CGACGTGCGC
GCCAACGCGA TCGACACCGG CTTTATCGAG CGTCACCTGA AAGACCTGAC CGGGACGCCG
GCCGTGCCGG GCGAGACCGA GCTTGCCGCC GCCGTCGCCG CGATCCTGCA AACGGAAAGC
AGGTCGTCCC GACCGGACGC GGCATCGCCC TGGCAAACCG CGGGCTGGAT GCCGGTTGGC
CGCCGTCAGC GGTGGTTCGT ATTCCGTCAG GGGCAGGTCG AGCACAAGGT CATATTCGCC
TATGGCAACG GCTCGGCCGA AATCCGGATT GGAGAAAAGG ATATCGCGCT CGCGTTTGCT
GCGGACGACG GCGGAGGTTT GACGCTCTCG CTCGACGGAA TGCGAAGCCA CGTTGTCTCC
GTCGTCGAAG GGCGCGGCCT GTACTTGCGG ACGCGCAACG GTCGGTTCGA ACTGCACTGG
GTCGATCCGT TCGGCGGGGA CGACGAGGAG CAGGCCGCCG AAGATCGAAT CGTCGCGCCG
CTGCCCGGCA TCGTGGTCGC GCTGCTTGCG CAGGAGGGCG CGGTGCTGGA GAAGGGCGCA
CCCATCCTCA CGCTGGAAAT GATGAAGATG GAGCAGACGT TGCGCGCGCC CTACGCCGGC
AAGCTGAAAA AGCTCAAATG CAAGGTTGGC GATATCGTGC AGGAGGGCGT CGAACTCGCC
GACATCGAGC CCGCCGCTTA A
|
|---|
| Protein sequence | MAKRPQYRRF QTLLIANRGE IACRVIRSAR AMGLRTVAVY SEADRDALHV GMADDAVLLG
PAPARDSYLD IDKVIAAARR TGAEGIHPGY GFLSENAAFA QACADADLVF VGPTAAMMTA
MGSKSCAKAL MEKAGVPLVA GYHGEAQDDA TLQGAADRIG YPVLVKASAG GGGRGMRIVR
SAAELAPAVV SARREAKAAF GDDRMLIEKY VDNPRHIEVQ VIGDSHGNLL SLFERECTLQ
RRHQKVIEEA PSPTLDAAGR EAVCAAARKA AGAVNYVGAG TVEFVSDGKD VFFIEMNTRL
QVEHPVTELV TGVDLVEWQL RVAFGEKLPL TQDQIRLNGH AIEARVYAEN PNKNFMPSVG
RIRTWRTPPE VDGLRIDSGY REGDMVSPNY DAMLAKVIAW APTREAAISR LDRSLQETDV
RGVVTNIPFL SALVMHPDVR ANAIDTGFIE RHLKDLTGTP AVPGETELAA AVAAILQTES
RSSRPDAASP WQTAGWMPVG RRQRWFVFRQ GQVEHKVIFA YGNGSAEIRI GEKDIALAFA
ADDGGGLTLS LDGMRSHVVS VVEGRGLYLR TRNGRFELHW VDPFGGDDEE QAAEDRIVAP
LPGIVVALLA QEGAVLEKGA PILTLEMMKM EQTLRAPYAG KLKKLKCKVG DIVQEGVELA
DIEPAA
|
|---|
| |