Gene Nham_2113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2113 
Symbol 
ID4031943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2356389 
End bp2357048 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content61% 
IMG OID637970571 
Productubiquinol-cytochrome c reductase, iron-sulfur subunit 
Protein accessionYP_577370 
Protein GI92117641 
COG category[C] Energy production and conversion 
COG ID[COG0723] Rieske Fe-S protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.35102 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATA TCCCTTCCGG CGCGCAGATC AAAAAACCTT CGGGCCGCAG TCCGACCCGG 
CGCGATTTTC TCTATATCGC GACCGCCGCC GTGGGCACCG TTGGAGTCGC CGCGGCGATC
GTCCCTATGA TCTCGCAGTT AGAGCCGGAT AAGGCGACGC TCGCAGCCGG CGGTCCCGTC
GAACTCGACC TTTCCCAAGT TCAGCCGGGG CAGCAGGTGA GCGTCCGCTG GCGCGACCAT
CCGATCCTCG TCATCAACCG TTCCGATGCG GCGCTGAAGA CCCTTCAGGA TCCGAAGCTG
CTGGCCCAGC TTTCCGATCC CCAATCCAGC GAGTTTCAGC AGCCGGAATA CGCGCACAAC
TGGCACCGCT CGGCCAATCC GGAATACGGA GTCTTCGTCG GAATCTGCAC TCACCTCGGC
TGCATCCCGC TTTACTACCC GAGCCCGAAT GCCAACCATC CGGCGTCGGA CTGGCTCGGC
GGCTACTTCT GCCCGTGTCA TGGATCGAAA TACGATCTCG CGGGCCGGGT CTTCAGCGGC
GTGCCGGCGC CATACAATCT GCCGGTGCCG CCGTATCGCT TCGTCAGCGA CAGCACGATC
CGGATTGGAG AAAATCCGTC AAACTCGAAT TTCAATTTTT CGGATATTCG GCAAATTTAG
 
Protein sequence
MTDIPSGAQI KKPSGRSPTR RDFLYIATAA VGTVGVAAAI VPMISQLEPD KATLAAGGPV 
ELDLSQVQPG QQVSVRWRDH PILVINRSDA ALKTLQDPKL LAQLSDPQSS EFQQPEYAHN
WHRSANPEYG VFVGICTHLG CIPLYYPSPN ANHPASDWLG GYFCPCHGSK YDLAGRVFSG
VPAPYNLPVP PYRFVSDSTI RIGENPSNSN FNFSDIRQI