Gene Nham_2109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2109 
Symbol 
ID4031939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2350181 
End bp2350633 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content60% 
IMG OID637970567 
ProductDoxX 
Protein accessionYP_577366 
Protein GI92117637 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGCGT TCATCACTGT CGGACGAGTC CTGTTTTCTG TGTTGTTCAT CGTTTCAGGC 
GCGTCCAAGC TGTTCGACAT CGCGGCGACC GCGGAGGGGA TTGCGTCCAA GGTCGTCATC
CCGGCCGTGC TGACGGGCTT CACCACCCAG ATCGAGGGTT TGACAGGTCT GCCGACCGCT
CACATGCTGG CGATCGCGGT CGGCGCGCTT GAGCTTATCT GCGGCGTCTT CATCGCGCTC
AACCTCGGAG CGCGTTTCTT TTCGTGGGTG CTGGCGGTAT TTATCGTCGT GGCGACGTTC
TACTACCACG ACTTCTGGAA CCAGACCGGG CCCGAAGCGA GGAACAACAT GATCCACGCG
TTGAAGAACC TGTCGCTGAT CGGAGCGTTG TTCATCATCG CCGGGATCGA TCGTCGCCCG
CCAAAGGCCG AGCCGATTGG CGGCGAAGCC TGA
 
Protein sequence
MPAFITVGRV LFSVLFIVSG ASKLFDIAAT AEGIASKVVI PAVLTGFTTQ IEGLTGLPTA 
HMLAIAVGAL ELICGVFIAL NLGARFFSWV LAVFIVVATF YYHDFWNQTG PEARNNMIHA
LKNLSLIGAL FIIAGIDRRP PKAEPIGGEA