Gene Nham_2106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2106 
Symbol 
ID4031936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2346904 
End bp2348415 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content62% 
IMG OID637970564 
Producthypothetical protein 
Protein accessionYP_577363 
Protein GI92117634 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATGAGT ATTGGTCTTC TCTCCCGGCG ACATGGTGGC GATTATTATT GGCGGGCAAA 
CTTTTCCCGG CCCAGGCGGC TGCGTATCTC GGTCCAGTGC GGCTTCGGCT CGGACTGGTC
ACCGCCATCC TGATCGGACT GATGTCACCC GCGCAGAGCC AGATATTCTG GCAGAACGAT
TATCCGGACG ATTATCCGGA GGTCTATATC GAAGCGCCCC CTCCACCTCC CGTCACGAGG
CCCCAGCCGC ATCGAGCCAA GCATCACCGC CACGCAAAGC CGGAATCGGC CGCCAAGGTT
GCGCGCAAGC CCCAGGGCCC GATCATCATT GCCATTTCGA TCCGCCGGCA AACGCTCAAG
GTCTATGACG CCAACGGCCT TTTCGCCGAA ACGCCGGTAT CGACCGGAAT GCGCGGCCAC
TCGACCCCGA TGGGCGTTTT CAGCGTCATT CAGAAACAGA AATGGCACCG CTCGAACATC
TACAGCGGCG CGCCGATGCC CTACATGCAA CGCATCACCT GGTCCGGCAT TGCGATGCAC
GCGGGGGTGC TTCCGGGTTA TCCCGCATCG CATGGATGTA TCCGAATGCC TATGAGCTTC
GCGGTGAAAA TGTGGCGCTG GACCAGAATA GGCGCGCGGG TGATCATCAC GCCCGGCGAA
GTGACGCCTG CGGAATTTTC GCATCCGCTG CTGACAACCC ATCGACCCGA GCGTGCTCCC
GTCGCCGCCA AAGTGCTAAC CGCCAATGCC GACGGCGCGA TGGCGCAACG GGCGGTTCTA
TCAACCGCGA CCGATTCGCC TGTGGCGAGC GAGCCTCAGA GTGCAACACC TGAGCCGGCG
GCCGATCCGA TCAAGGTCGA TACAGACTAC AAAAAGGACG CCGACGTCAC GGCAGCAACA
GGCGTCAAGC CTGAGGCCGA CGCGCCCAGA ACGGAAGACA AGCCGCAAAG CGCCGGTTCC
GCCGCCGCCG CCGCTGTCAC GGCGACAGCA CACGATCAGT CTCAACCCTC ACCGGCGAGC
GACGTGAACG CCGAGTCCGT GGCGATCTCT GCGCTCAAGC GGAGCGATCG GATCGCGGTC
TTTGTCAGCC GCAAGGACAG CAAGATTTAC GTGCGGCAGA ACTTTGCACC GCTATTCAAT
GCTCCCGTCA CCATCACCCC GAGCGATCGG CCGTTGGGAA CACACGTGTT CACGGCCGAA
GCCGGCAAGG ACAGCAAGGA CGACTTCCGT TGGTCGGTGG TGTCGCTCCC GGCAATGGCG
CATCGCGCGG ATCGGGTTCA CCTCCGCGAA AACCAGTCCC ACCAGCGAAC GGCCGGTGTC
GACGCAAAGC CCAGACCGAC TCCTGTTCCG GACAGTGCTA CCGACGCACT GGACCGCATC
TCCCTTCCTG AAGACGTCAT GACGAAAATC GCCGACTCGC TTTCGACCGG CGACTCCATC
GTCGTGTCCG ATCAGGGCAT CGCCGGCGGT GAAACCGGCC AAGGCACCGA CTTCATCGTC
AAGCTCCAAT AG
 
Protein sequence
MNEYWSSLPA TWWRLLLAGK LFPAQAAAYL GPVRLRLGLV TAILIGLMSP AQSQIFWQND 
YPDDYPEVYI EAPPPPPVTR PQPHRAKHHR HAKPESAAKV ARKPQGPIII AISIRRQTLK
VYDANGLFAE TPVSTGMRGH STPMGVFSVI QKQKWHRSNI YSGAPMPYMQ RITWSGIAMH
AGVLPGYPAS HGCIRMPMSF AVKMWRWTRI GARVIITPGE VTPAEFSHPL LTTHRPERAP
VAAKVLTANA DGAMAQRAVL STATDSPVAS EPQSATPEPA ADPIKVDTDY KKDADVTAAT
GVKPEADAPR TEDKPQSAGS AAAAAVTATA HDQSQPSPAS DVNAESVAIS ALKRSDRIAV
FVSRKDSKIY VRQNFAPLFN APVTITPSDR PLGTHVFTAE AGKDSKDDFR WSVVSLPAMA
HRADRVHLRE NQSHQRTAGV DAKPRPTPVP DSATDALDRI SLPEDVMTKI ADSLSTGDSI
VVSDQGIAGG ETGQGTDFIV KLQ