| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2084 |
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| Symbol | |
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| ID | 4030939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2324343 |
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| End bp | 2328134 |
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| Gene Length | 3792 bp |
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| Protein Length | 1263 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637970542 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_577341 |
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| Protein GI | 92117612 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTCC AACGGCGTTA CACCAAAGAT GGCCAGTCTC CCTATGCGGA GATCGATTTC
CGGCTGACAA CGAGCGAGAT CCGCAATCCG GACGGCTCGG TGGTGTTTCG CCTCGAGAAC
GTGGAAGTGC CGGAGTTCTG GTCGCAGGTG GCTTCCGACG TTCTGGCCCA GAAGTATTTC
CGCAAGGCGG GCGTCGCGGC GCGCCTGAAG AAGGTCGAGG AAGAGACCGT GCCGTCGTGG
CTATGGCGCT CGGTGCCGGA CACCGAGGCG CTCAGCCTGC TGCCCGAAAA AGAGCGCTTC
GGCAGCGAAC TCTCTTCAAA GCAGGTGTTC GATCGGCTCG CGGGGTGCTG GACCTATTGG
GGCTGGAAAG GCGGCTACTT TTCAAGCGAG GACGACGCCC GCGCCTTCAA TGACGAGTTG
CGCTACATGC TGGCGCGCCA GATGGTGGCG CCGAACTCGC CGCAGTGGTT CAACACCGGA
CTGCATTGGG CCTACGGCGT CGACGGACCC GGCCAGGGCC ACTACTACGT CGACTTCAAG
ACCGGCAAGA TGACCAGGTC GAAGTCGTCC TACGAGCATC CGCAGCCGCA CGCCTGCTTC
ATCCAGGGCA TCGAGGACGA CCTCGTCAAC GAGGGCGGCA TCATGGACCT GTGGGTGCGC
GAAGCGCGTC TGTTCAAGTA CGGCTCCGGC ACTGGCTCGA ATTTCTCGCG GCTGCGCGGC
GAAGGTGAAC GCCTCTCCGG TGGCGGCCGA TCCTCCGGCC TGATGAGCTT CCTCAAGATC
GGCGACCGCG CCGCGGGCGC GATCAAGTCG GGCGGCACCA CGCGCCGCGC CGCCAAGATG
GTGGTGGTCG ATGCCGACCA TCCGGACATC GAGACCTACA TCGACTGGAA GGTGAAGGAG
GAGCAGAAAG TCGCCGCGCT GGTCACCGGC TCGAAGCTGA ACCAGAAGCA CCTCAAGGCC
ATCATGAAGG CCTGCGTCAA CTGCGAGGGC TCGGGCGACG ACTGCTTCGA TCCAGAGAAG
AACCCGGCGC TGCGCCGCGA GATCAAGCTG GCGCGCCGCG CGCTGGTCAA CGACAACGTC
ATCAAGCGGG TGATCCAGTA CGCCCGGCAG GGTTACAAGG ACATCGACTT CCCGGTCTAC
GATACCGACT GGGACTCCGA GGCCTATCTC ACCGTCTCCG GCCAGAACTC CAACAACTCG
GTGTCGCTGA GGGACGACTT CCTGCGCGCG GTCGAGACCG ACGGCGACTG GAATCTGATC
GGCCGCACCA ACAAGAAAGT GATGAAGACG CTGAAGGCCC GCGATCTCTG GGAGAAGATC
GGCTACGCCG CCTGGGCGTC GGCCGATCCC GGCCTGCACT TCAACACCAC CATGAACGAC
TGGCACACCT GCAAGGCGTC CGGCGACATC CGCGCGTCGA ATCCGTGCTC GGAATACATG
TTTCTCGACG ATACTGCCTG CAACCTCGCC TCCGCCAACC TGATCACGTT CTACGACACC
GCCTTGAAGC GTTTTGACGT CGATGCCTAC GAGCACGTCT GTCGTCTGTG GACCGTCGTG
CTGGAAATCT CGGTGCTGAT GGCCCAGTTC CCATCGAAGG CGATCGCGGA ACTGTCCTAT
GAATTCCGCA CGCTGGGCCT CGGCTTCGCC AACATCGGCG GCCTTTTGAT GACCATGGGC
CTGCCCTATG ACAGCAAGGA AGGCCGCGCG CTGTGCGGCG CGCTGACCGC GATCATGACC
GGCATCGCCT ACAAGACGTC CGCCGAGATG GCCGGCGAAC TCGGCGCCTT CCACGGCTAC
AAGAAAAACA CCGGCCACAT GCTGCGCGTG ATCCGCAATC ACCGCCGCGC CGCGCTCGGT
CAGTCGCACG GCTACGAGGC GCTCGCGGTC AACCCGGTGC CGCTCGACCA TGCCTCCTGC
CCGCAAGCCG ACCTCATCGT CCACGCGACG AAGGCGTGGG ACGATGCGCT CGCGCTCGGC
GAACAGCACG GCTACCGCAA TGCGCAGGTC ACCGTGGTGG CGCCGACCGG CACCATCGGC
CTCGTGATGG ATTGCGACAC CACCGGCATC GAGCCTGACT TCGCGCTGGT GAAATTCAAG
AAGCTCGCCG GCGGCGGCTA CTGGAAGATC ATCAACCGCG CCGTGCCGGA GGCGCTGCGC
GTGCTCGGCT ATCGCGAGAG CGAGATCGCC GAGATCGAGG CCTATGCGGT CGGTCACGGC
TCGCTGTCCA ACGCGCCCGG CATCAACGTC TCCACCTTGA AAGCTAAAGG CTTCACCGAC
GAAGCCATTG CCAAGGTGGA AAAGGCGCTG CCGACCGCGT TCGACATCAA GTTCGCCTTC
AACAAATGGA CGTTTGGCGA AGACTTCATC CGCGACACGC TCGGCATCGA CTCCGAGACC
ATCGCCTCGC CGACCTTCGA CCTGCTCGCG GCGGTCGGCT TCAGCAAGCG TGAAATCGAA
GCCGCCAACG TGCACATCTG CGGCGCGATG ACGGTGGAAG GCGCGCCGCA CCTCAAGGCC
GAGCACTACG CGGTGTTCGA CTGCGCCAAT CCCTGCGGCA AGATCGGCAA GCGCTATTTG
TCGGTGGAGA GCCACATCCG GATGATGGCG GCGTCGCAAC CGTTCATCTC GGGCGCGATC
TCGAAAACCA TCAACATGCC GAATGACGCC ACGGTGGACG ACTGCAAGTC GGCCTATCTT
TTGTCCTGGA AGCTCGCGCT GAAAGCTAAC GCGCTCTATC GCGACGGCTC GAAGCTCAGC
CAGCCGCTCA ACTCGCAGCT CATCAGCGAT GACGACGAGG AGGACGACGC GATCGAGACG
TTCTATGACA AGCCGATGGC GGCGCGCACC GCGCAGGTAT CGGAAAGGGT CGTGGAGAAA
CTGGTCGAGC GCATCGTCGT GCTGCGCGAA CGCGAGAAGA TGCCGGACCG CCGCAAGGGC
TATACCCAGA AGGCGGTCGT CGGCGGCCAC AAGGTTTACG TCCGCACCGG CGAATACGAC
GACGGCCGCA TTGGCGAGAT CTTCATCGAC ATGCACAAGG AAGGCGCGGC GCTGCGCTCC
TTCATCAACA ACTTCGCCAT CGCGGTGTCG CTCGGCCTGC AATACGGCGT GCCGCTGGAA
GAGTATGTCG ACGCCTTCAC CTTCACCCGC TTCGAGCCTG CCGGCCCGGT GCAGGGCAAC
GACTCCATCA AGTACGCGAC GTCGATCCTC GACTATGTGT TCCGCGAACT CGCGGTGAGC
TATATGGGCC GCTACGACCT CGCCCATGTC GATCCCAGCG AATCCGGTTT CGACGCCATC
GGCAAGGGTG TCGCCGAAGG CAAGGAGCCG GAAGGCCAGC AGGCCACCCG TTACGTCTCC
AAGGGCCTGA CCCGCTCGCG TACCGACAAT CTTGTGGTGA TGCGTGGCTC TTCTTCCTCC
CCGCTCGGTG GGGAGGGTAG CGCACGAAGC GTCTCTACTT CTCCCTCCCC CCTCGCGGGG
GAGGATCGAG GTGGGGGGGC CAATGTCACC GCCCTCTCCT CTTCGCGCAT GGGCGACACG
CTCGAAGGCG CGACCGCGCT GAAGCAGGAA GCACCGCACG ATCTTTCGCC GACTGAACGG
CTGAAGCAGC AGCAGAGGAG CAAAGCCGGC GCCCCCGCTC AAGCTGCACC CTCGAAAGCC
GAACGCCGCG CCGAAGCAAA AGCAAAAGGC TACGAAGGCG AGATGTGCTC GGAGTGCGGC
AACTTTACAC TGGTGCGCAA CGGCACCTGC ATGAAGTGCG ACACGTGTGG ATCGACGACG
GGGTGTTCGT GA
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| Protein sequence | MRFQRRYTKD GQSPYAEIDF RLTTSEIRNP DGSVVFRLEN VEVPEFWSQV ASDVLAQKYF
RKAGVAARLK KVEEETVPSW LWRSVPDTEA LSLLPEKERF GSELSSKQVF DRLAGCWTYW
GWKGGYFSSE DDARAFNDEL RYMLARQMVA PNSPQWFNTG LHWAYGVDGP GQGHYYVDFK
TGKMTRSKSS YEHPQPHACF IQGIEDDLVN EGGIMDLWVR EARLFKYGSG TGSNFSRLRG
EGERLSGGGR SSGLMSFLKI GDRAAGAIKS GGTTRRAAKM VVVDADHPDI ETYIDWKVKE
EQKVAALVTG SKLNQKHLKA IMKACVNCEG SGDDCFDPEK NPALRREIKL ARRALVNDNV
IKRVIQYARQ GYKDIDFPVY DTDWDSEAYL TVSGQNSNNS VSLRDDFLRA VETDGDWNLI
GRTNKKVMKT LKARDLWEKI GYAAWASADP GLHFNTTMND WHTCKASGDI RASNPCSEYM
FLDDTACNLA SANLITFYDT ALKRFDVDAY EHVCRLWTVV LEISVLMAQF PSKAIAELSY
EFRTLGLGFA NIGGLLMTMG LPYDSKEGRA LCGALTAIMT GIAYKTSAEM AGELGAFHGY
KKNTGHMLRV IRNHRRAALG QSHGYEALAV NPVPLDHASC PQADLIVHAT KAWDDALALG
EQHGYRNAQV TVVAPTGTIG LVMDCDTTGI EPDFALVKFK KLAGGGYWKI INRAVPEALR
VLGYRESEIA EIEAYAVGHG SLSNAPGINV STLKAKGFTD EAIAKVEKAL PTAFDIKFAF
NKWTFGEDFI RDTLGIDSET IASPTFDLLA AVGFSKREIE AANVHICGAM TVEGAPHLKA
EHYAVFDCAN PCGKIGKRYL SVESHIRMMA ASQPFISGAI SKTINMPNDA TVDDCKSAYL
LSWKLALKAN ALYRDGSKLS QPLNSQLISD DDEEDDAIET FYDKPMAART AQVSERVVEK
LVERIVVLRE REKMPDRRKG YTQKAVVGGH KVYVRTGEYD DGRIGEIFID MHKEGAALRS
FINNFAIAVS LGLQYGVPLE EYVDAFTFTR FEPAGPVQGN DSIKYATSIL DYVFRELAVS
YMGRYDLAHV DPSESGFDAI GKGVAEGKEP EGQQATRYVS KGLTRSRTDN LVVMRGSSSS
PLGGEGSARS VSTSPSPLAG EDRGGGANVT ALSSSRMGDT LEGATALKQE APHDLSPTER
LKQQQRSKAG APAQAAPSKA ERRAEAKAKG YEGEMCSECG NFTLVRNGTC MKCDTCGSTT
GCS
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