Gene Nham_2060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2060 
Symbol 
ID4031481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp2286189 
End bp2286839 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content50% 
IMG OID637970518 
Producthypothetical protein 
Protein accessionYP_577318 
Protein GI92117589 
COG category[S] Function unknown 
COG ID[COG4627] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.572806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGCAG ATGGGCTTCC CGAGGACCCG TATTTATATT TCGGCAATCT CGGTAAAACA 
GAGCCGCAGT ACAAGATCCC TAATTTCGTT GGTCTTTGTC TCGTTCCTCG ATCTGAACGA 
GAGATCAAGC ACGATTTGAA CGATCCGCTT CCGGTGCCGG ACAATTCGAT CAAAAAGATC 
CAGGCGCAGG ATGTGATGGA GCACATCCCG AAAGATCGCG TTCCAAGTCT TTTGGATGAG 
GTCTATCGCG TATTGGTGCC GGGTGGCATT TTCCGCCTCA GTGTGCCGGA CTATCGCAGT 
CCTCTACTTA AGGCGCGGAC TGTCTTTGAT CATAAAGGGA ACGTGCTCGC TGACTTGATG 
ATGGGCGCGA AAGTCGAGTA CGACACCAAA AATGCAGCCT ACAAGACGGT ATTCATGACC 
GATGGTTCTG CCCATCTATG GTTTCCAACC TACGAGCATG TGCTAGATTT GATCCTGCGA 
TCCGAGATCA GGAAATCTTC GAAAATCACC TTCCACCATT ATTGGCTGGA CGATGAGACT 
TCGGTGACGA ATTCATTTCC CGAGAACGAA ATGTTCGTTT TCAGGTGTCC TCCGCGGGAC 
CTGAGGGCCG GCGGCAAGGC TATTTCGATC ATCGTTGATT TCATCAAATA A
 
Protein sequence
MVADGLPEDP YLYFGNLGKT EPQYKIPNFV GLCLVPRSER EIKHDLNDPL PVPDNSIKKI 
QAQDVMEHIP KDRVPSLLDE VYRVLVPGGI FRLSVPDYRS PLLKARTVFD HKGNVLADLM 
MGAKVEYDTK NAAYKTVFMT DGSAHLWFPT YEHVLDLILR SEIRKSSKIT FHHYWLDDET 
SVTNSFPENE MFVFRCPPRD LRAGGKAISI IVDFIK