Gene Nham_1933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1933 
Symbol 
ID4030536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2149587 
End bp2150273 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content56% 
IMG OID637970396 
ProductCBS domain-containing protein 
Protein accessionYP_577198 
Protein GI92117469 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.316651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCGC GTGACGTAAT GGTGTCGCCG GTTATCGCGG CCGGAGAGGA TGCAACCGTG 
CAAGACGTGG CGAAGACAAT GATTGCCAGA CGCATCAGCG CCGTACCCAT CGTCGACAAA
GCAGGAAAGC TCGTCGGAAT CGTCACCGAA GCTGACCTAA TACATCGCAT CGAGGTGGGG
ACTGAACGCC CCTACTCCTG GTGGCTGCAT ATGCTATCCG GAGATCGGAC GATGGCAGAG
GGCTATGTCA AGTCTCATGC CAGAAAGATC ACGGACATCA TGACACGAGA GGTCAAGACA
GCCGATCCCG AAACGCCTCT GATTGACATT GCCGAGCTGT TCGAAACGAA CGGCATCAAG
CGAGTGCCCA TTGTCAACCA AGCGGGCGAC CTGATCGGCA TTGTCAGTCG CGCAAATATC
ATCCAGGCCG TGGCGAGTGC CCGGCCACAC TTCGAGATCA TGCTGTCGGA CGCTGCGATC
CGTCAGAAGT TGATGGAAGA ACTCAAGAAA CAACCGTGGG CGCACACCCA CAAACTCAAT
GTCACCGTCA CCCACGGGAT TGTCGATTTG TGGGGTATGG CCGAGTCCGA GCAGGTCAGA
AAGGCGATCT ACACCGTGGC GGTAAACGTG CCTGGAGTGG ACGCTGTCAA CGACCACCTC
ATTCAGGAGC CGGTGTTTAT TTACTGA
 
Protein sequence
MKARDVMVSP VIAAGEDATV QDVAKTMIAR RISAVPIVDK AGKLVGIVTE ADLIHRIEVG 
TERPYSWWLH MLSGDRTMAE GYVKSHARKI TDIMTREVKT ADPETPLIDI AELFETNGIK
RVPIVNQAGD LIGIVSRANI IQAVASARPH FEIMLSDAAI RQKLMEELKK QPWAHTHKLN
VTVTHGIVDL WGMAESEQVR KAIYTVAVNV PGVDAVNDHL IQEPVFIY