Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1933 |
Symbol | |
ID | 4030536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 2149587 |
End bp | 2150273 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637970396 |
Product | CBS domain-containing protein |
Protein accession | YP_577198 |
Protein GI | 92117469 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3448] CBS-domain-containing membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.316651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCGC GTGACGTAAT GGTGTCGCCG GTTATCGCGG CCGGAGAGGA TGCAACCGTG CAAGACGTGG CGAAGACAAT GATTGCCAGA CGCATCAGCG CCGTACCCAT CGTCGACAAA GCAGGAAAGC TCGTCGGAAT CGTCACCGAA GCTGACCTAA TACATCGCAT CGAGGTGGGG ACTGAACGCC CCTACTCCTG GTGGCTGCAT ATGCTATCCG GAGATCGGAC GATGGCAGAG GGCTATGTCA AGTCTCATGC CAGAAAGATC ACGGACATCA TGACACGAGA GGTCAAGACA GCCGATCCCG AAACGCCTCT GATTGACATT GCCGAGCTGT TCGAAACGAA CGGCATCAAG CGAGTGCCCA TTGTCAACCA AGCGGGCGAC CTGATCGGCA TTGTCAGTCG CGCAAATATC ATCCAGGCCG TGGCGAGTGC CCGGCCACAC TTCGAGATCA TGCTGTCGGA CGCTGCGATC CGTCAGAAGT TGATGGAAGA ACTCAAGAAA CAACCGTGGG CGCACACCCA CAAACTCAAT GTCACCGTCA CCCACGGGAT TGTCGATTTG TGGGGTATGG CCGAGTCCGA GCAGGTCAGA AAGGCGATCT ACACCGTGGC GGTAAACGTG CCTGGAGTGG ACGCTGTCAA CGACCACCTC ATTCAGGAGC CGGTGTTTAT TTACTGA
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Protein sequence | MKARDVMVSP VIAAGEDATV QDVAKTMIAR RISAVPIVDK AGKLVGIVTE ADLIHRIEVG TERPYSWWLH MLSGDRTMAE GYVKSHARKI TDIMTREVKT ADPETPLIDI AELFETNGIK RVPIVNQAGD LIGIVSRANI IQAVASARPH FEIMLSDAAI RQKLMEELKK QPWAHTHKLN VTVTHGIVDL WGMAESEQVR KAIYTVAVNV PGVDAVNDHL IQEPVFIY
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