| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1841 |
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| Symbol | hfq |
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| ID | 4033018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2052001 |
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| End bp | 2052249 |
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| Gene Length | 249 bp |
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| Protein Length | 82 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637970313 |
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| Product | RNA-binding protein Hfq |
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| Protein accession | YP_577115 |
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| Protein GI | 92117386 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGATAG ACCGCGCACA AAACCTTCAG GACACCTTCC TCAACCATGT TCGAAAGACC
AAGACGCCCC TGACAATCTT TCTGGTGAAC GGGGTCAAAC TGCAGGGAAT TGTCACCTGG
TTCGACAATT TCTGCCTGCT GCTCAGGCGC GACGGTCATT CGCAGCTTGT CTACAAACAT
GCGATTTCGA CCATTATGCC GGGCGCCCCG ATCCAGTTGT TCGAAGGCGG CGAGGACGCT
CCGCTTTGA
|
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| Protein sequence | MAIDRAQNLQ DTFLNHVRKT KTPLTIFLVN GVKLQGIVTW FDNFCLLLRR DGHSQLVYKH
AISTIMPGAP IQLFEGGEDA PL
|
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