Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1834 |
Symbol | |
ID | 4033011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 2041956 |
End bp | 2043215 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637970306 |
Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
Protein accession | YP_577108 |
Protein GI | 92117379 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.669413 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTAAGGG CAGCGGAGTT TCCTCCTCCA GCGACACCAT TGATTCCAAT GCCGACCTCA AAACGAACTG CCGCCATCAT TGTTGCCGCA GGCCGCGGGC TCCGCGCCGG TACCGGCGGT CCCAAGCAAT ACCGGACCAT CGCCGGGCGG ACCGTGATTG CGCGGGCCAT GGAGGCGTTT TGCGATCACC CCGACGTTTT CGCGGTCCAA CCGGTGCTCA ATCCGGATGA CCTTGCGATG TTCAATCAGG CCGTCGCCGG GTTTCGCTAT CGGCCACCGG CGAATGGCGG CGCCACCCGT CAGGCCTCCG TTCACGCCGG CCTCGAAGCC CTCGCCGCTG ATGCGCCGGA CATCGTGCTG ATTCACGATG CCGCCCGGCC ATTCGCGACG CCGGCGCTGA TCCGGCGCGC GATCGAGGCC ACCGATATAA CCGGCGCGGC GGTGCCCGTC ATTCCCGTCA CCGACACCAT CAAACAGGTC GATGCGTCCG GCGCTGTCAA TGCGACCCCC GATCGTGCAA AACTGCGGAT CGCGCAGACG CCGCAGGCGT TCCGTTTCGA TGTGATCCTC GACGCGCATC GCCGCGCGGC ACGCGACGGC CGCGACGATT TCACCGACGA CGCCGCGCTC GCCGAGTGGG TGGGATTGAC GGTTGCGACA TTCGAAGGCG ATGCTGCCAA CATGAAACTC ACAACTCCGG AAGATTTCGT GCGCGAGGAA GCGCGCCTCG CAGCAATGCT CGGCGACATC AGGACCGGCA CCGGCTACGA TGTCCACGCC TTCGGCGACG GCGACCACGT CATGCTGTGC GGGGTGAAGG TCCCGCACAA TCGCGGCTTC CTGGCGCACT CCGACGGCGA CGTCGGCCTG CACGCGCTGG TCGATGCCAT CCTAGGCGCG CTGGCGGACG GCGACATCGG TTCGCATTTT CCGCCGAGCG ATCCGCAGTG GAAGGGCGCG GCCTCCGACA AATTCCTGAA ATACGCCGTC GACCGCGTCG CCGCGCGCGG CGGCCGCATC GCCAATCTCG AAGTCACCAT GATCTGCGAG CGGCCCAAAA TCGGACCCTT GCGCGATACG ATGCGGGCGC GCATCGCCGA AATCACGGGC GTCGCGATTT CACGCATCGC CGTAAAGGCG ACTACCAGCG AGCGGCTCGG ATTCACCGGG CGCGAGGAAG GAATCGCGAC GACAGCCAGC GCCACTGTCC GCCTGCCCTG GAACGATAGC GACCAGGAAG ACAAGGGCTG GAGCACCTGA
|
Protein sequence | MVRAAEFPPP ATPLIPMPTS KRTAAIIVAA GRGLRAGTGG PKQYRTIAGR TVIARAMEAF CDHPDVFAVQ PVLNPDDLAM FNQAVAGFRY RPPANGGATR QASVHAGLEA LAADAPDIVL IHDAARPFAT PALIRRAIEA TDITGAAVPV IPVTDTIKQV DASGAVNATP DRAKLRIAQT PQAFRFDVIL DAHRRAARDG RDDFTDDAAL AEWVGLTVAT FEGDAANMKL TTPEDFVREE ARLAAMLGDI RTGTGYDVHA FGDGDHVMLC GVKVPHNRGF LAHSDGDVGL HALVDAILGA LADGDIGSHF PPSDPQWKGA ASDKFLKYAV DRVAARGGRI ANLEVTMICE RPKIGPLRDT MRARIAEITG VAISRIAVKA TTSERLGFTG REEGIATTAS ATVRLPWNDS DQEDKGWST
|
| |