| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1826 |
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| Symbol | |
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| ID | 4033003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2032463 |
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| End bp | 2033926 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637970298 |
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| Product | Type I secretion outer membrane protein, TolC |
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| Protein accession | YP_577100 |
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| Protein GI | 92117371 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGCGAT CGGGTGCAGA AGCGCAGCCT CGTTGGGTCC GGCAAAGGAA GAATGGAACT
CCGCGGATGG GTGGTGTGAG ACTACTGGCC GGGGCTGCCG CGTTGGCTCT TGTGACTGCA
TGGTCAGGGG TGGCGACACC GGCCCTCGCC GACACGATCG AGTCCGCGCT GGTGCGCGCC
TACCAGAACA ATCCTCAACT CAATGCGCAG CGCGCCTCGG TGCGCGCCAC CGATGAAAAC
GTGCCGCAGG CTCTGTCGGG CTACAGGCCC AAGGTCGCCA TAACCGCCAG CGGCGGTTAT
CAGTATACGG ACTCCACGCA AAGTGTGCCG GGAGGCCCGC CGTCGGCGCT TCACGGCGCA
CAGGCGCCGG TGGCTGTCGG CGCCACGGTT TCGCAGACGC TCTTCGACGG CTTCCAGACC
TCCAACAAGA CCCGTGCGGC GGAAGGACAG GTGTCGGCCG CGCGCGAGGG CTTAAGGGTT
CTTGAACAGA CCGTGCTGCT CGCTGCGGCA ACCATCTACA TGGACTATTT GCGCGACTCC
GCCATCGTGG AAGTCCAGCG CAGCAACGTC CGTGTGCTCG AGGAGACGCT GAAGCAAACC
CGCGACCGTT TCAGCGTCGG CGAAGTCACC CGCACCGACG TTGCGCAGTC GGAAGCTCAG
CTCGCCGCCG GCCGCACCCA GCTTTTGACC GCCGAATCCA CCCTCACGAC CACACGTTCG
AATTTTCGCC GCATCATCGG CAACGAACCG GCGCAACTGG CGCCGGGTTC GCCGGTCGAT
CGTTTCTTGC CGGGTACGCT CGCAGGCGCC ACGGATCTTG CTCTTACCCA AAACCCCAAT
GTGACCGCGT CGATGTACGG CATCGACGTC AGCCACCTGC AGGTCAAGGT TGCCGAGGGC
GCGCTGTTCC CGACCGTGAC TCTCCAGGCC AACGTGCAGC AGGGTAACCA ACAGCAACTC
ACTGTTCCGA AGCAGTTCTT TGCATCCGCG ATCGCGCAGG TGTCGGTGCC GATCTACCAG
GGCGGCGCGG AGTATTCGCT GATCCGCCAG TCGAAGGAAA CGCTGGCGCA ACAACGTCTC
AGCCTCGAGC AGGTCCGCGA TCAGACACGC GCCAGCGTGG CGCAGGCATG GGGCCAGCTT
CTCGCGGGCA AGTCGCAGGT GGCCTCGGCG CAGGCGCAAG TCAAGGCGTC CGAGATCGCG
CTCAACGGCA TTCGCGAAGA GGCCAAGGCC GGGCAGAGGA CCACGTTCGA CGTGTTGACC
GCGCAACAGA CGCTCGTCAA CGCGCGCGTG GCACTGGTGA CGGCTCAACA CGATCGCGTC
GTCGCATCCT ACGCCGTGTT GAATGCTGTC GGCCGGCTGT CGCCGCATGT GCTGAAGCTA
AAGACTACTG TTTACGATCC GAGTGTCCAT TATCATCAGG TTCGCGACAG TTGGGCCGGC
GTCCGTACGC CGGACGGGCA ATGA
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| Protein sequence | MGRSGAEAQP RWVRQRKNGT PRMGGVRLLA GAAALALVTA WSGVATPALA DTIESALVRA
YQNNPQLNAQ RASVRATDEN VPQALSGYRP KVAITASGGY QYTDSTQSVP GGPPSALHGA
QAPVAVGATV SQTLFDGFQT SNKTRAAEGQ VSAAREGLRV LEQTVLLAAA TIYMDYLRDS
AIVEVQRSNV RVLEETLKQT RDRFSVGEVT RTDVAQSEAQ LAAGRTQLLT AESTLTTTRS
NFRRIIGNEP AQLAPGSPVD RFLPGTLAGA TDLALTQNPN VTASMYGIDV SHLQVKVAEG
ALFPTVTLQA NVQQGNQQQL TVPKQFFASA IAQVSVPIYQ GGAEYSLIRQ SKETLAQQRL
SLEQVRDQTR ASVAQAWGQL LAGKSQVASA QAQVKASEIA LNGIREEAKA GQRTTFDVLT
AQQTLVNARV ALVTAQHDRV VASYAVLNAV GRLSPHVLKL KTTVYDPSVH YHQVRDSWAG
VRTPDGQ
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