| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1800 |
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| Symbol | secF |
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| ID | 4032977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2001793 |
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| End bp | 2002815 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637970272 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_577074 |
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| Protein GI | 92117345 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0690803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCCACT GGATTTTACT CGGGCTCGGT GCCCTCATCG TTGTGCTGAC CATCGTCAGT
TGGTTCGGCC TGCTGCCATC GCTGCGGATC GTTCCCGACG ATACGCATTT CGATTTCACG
CGCTTCCGCC GCATCAGCTT TCCGATTTCC GCGGTGCTTT CGATCGTCGC CATCACGCTG
TTCTTCACGC ACGGCCTGAA TTTCGGCATC GATTTCAAGG GCGGCACGCT GCTCGAAGTG
CAAGCCAAGT CGGGCGAGGC GGACATCGCG ACGATGCGCA CGACGCTGAA CAAGCTCGGT
CTCGGCGAGG TCCAGCTCCA GCAGTTCGGC GGCCCGACCG AAGTGCTGAT CCGCGTCGCC
GAGCAGCCGG GCGGAGACGC CGCGCAGCAG GATGCCGTGC AGAAGGTGCG CGGTGCGCTG
GGCGAGAGCG TCAACTATCG CCGGGTCGAG GTGGTCGGCC CGCGGGTGTC CGGCGAATTG
CTCGCCTATG GCATGTTGGG CCTGATACTG GCGATCCTCG GCATCCTGAT CTATCTCTGG
TTCCGGTTCG AGTGGCAGTT TGCGCTCGGC GCCATGGTTG CGAACGTTCA TGACATCGTG
CTGACCATCG GCTTCATGTC GATCTCGCAA GTCGACTTCG ACCTCACCAG CATCGCGGCG
CTTCTGACCA TTCTCGGCTA CTCGCTGAAC GACACCGTCG TCATCTACGA CCGGATTCGC
GAAATGCTGC GGCGCTACAA GAAGCTGCCG ATGCCGGAAC TGCTCAACGA ATCCATCAAT
TCGACGCTGT CGCGCTCGAT CATCACCCAC GTCACGGTCA CGCTGGCGCT GCTCGCGTTG
CTGCTGTTCG GTGGAGCGGC CATTCACAGC TTCACCGCGG TGATGATGTT CGGCGTGGTG
CTGGTCGGCA CCTACACCTC GATCTTCATC GCTGCGCCGA TCCTGATCTA TCTCGGCGTC
GGCGATCACC GCGTCGACGT CGAGGAGAAG CTGGTCAAAT CCAAGAAGCC ATCGAAGCCG
TGA
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| Protein sequence | MTHWILLGLG ALIVVLTIVS WFGLLPSLRI VPDDTHFDFT RFRRISFPIS AVLSIVAITL
FFTHGLNFGI DFKGGTLLEV QAKSGEADIA TMRTTLNKLG LGEVQLQQFG GPTEVLIRVA
EQPGGDAAQQ DAVQKVRGAL GESVNYRRVE VVGPRVSGEL LAYGMLGLIL AILGILIYLW
FRFEWQFALG AMVANVHDIV LTIGFMSISQ VDFDLTSIAA LLTILGYSLN DTVVIYDRIR
EMLRRYKKLP MPELLNESIN STLSRSIITH VTVTLALLAL LLFGGAAIHS FTAVMMFGVV
LVGTYTSIFI AAPILIYLGV GDHRVDVEEK LVKSKKPSKP
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