Gene Nham_1781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1781 
Symbol 
ID4032957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1982700 
End bp1984184 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content65% 
IMG OID637970252 
Productputative beta (1-6) glucans synthase 
Protein accessionYP_577055 
Protein GI92117326 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG5309] Exo-beta-1,3-glucanase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCTATG CTCCGTTCCG GGGTCAACAG ACTCCGCTGG TCGCGACGAC CGAAATACCG 
CCTGAACAGA TCGCCGAGGA TCTTGCCCAA TTGGCCAAGA TCTCGAAATG CGTCCGGACC
TACTCGATCG AGAACGGCCT CGATCGGGTG CCGGCTCTGG CAGCGAAGGT CGGTCTCAAG
GTCATCCAGG GCATCTGGCT CGGCAACAAT CGCCTGAAAA ACCTCGCTCA GATCAATATC
GCGGTGGGTC TTGCGAAGGA ACACCCCGAC ACCATCATCG CGCTTGTTGT CGGCAATGAG
GTTCTGCTGC GCGGGGAAAT GACCGCCGCC GATCTCGTCG CCAACATCCG GCTGGTGAAG
TCGCAAGTGA CGGTGCCCGT CACCTATGCG GATGTCTGGG AATACTGGCT GCGCAACCGC
GAGGTCTATG ACGCGGTCGA TTTCGTCACC ATCCACATCC TGCCTTACTG GGAGGATTTG
CCGATCCGCG CGCGCAACGC CGCCGCGCAT GTCGACGCCA TCCGCAAGCG GGTCGCCGCG
GCCTTTCCCG CCAAGGAAAT CCTTATCGGC GAAACCGGAT GGCCGAGCGC CGGACGCATG
CGAGAAGGCG CGCTGCCCTC GCGCACCAAT CAGGCGCGCG TGGTGTCCGA AATTCTCGAC
ATGGCGAAGC GTGAGAAATT TCGCGTCAAC CTGATCGAGG CCTACGACCA GCCCTGGAAG
CGCCAGCTCG AGGGCACGGT CGGCGGCAAT TGGGGCTTGA TCGACGCCAC CCGGCGCAAG
CTGAAATACC CGGCCGGCGA GCCCATAAGC AATTTTCCGC TCTGGAAAAC CCAGATGGGC
GCCGGGATGG CATTGTGCAT CCTCGTCTTT GCGGTCGCCA TGCTGACGTT GCGGCGGAGG
CCGTGGACGC CACGGCCGAT GTCCTGGATC GCGGTTGCGG TTTCGGCGAC GTCGGCGGGA
ATCCTGCTGG GCGTGGCCGC GGACAAGCTG TGTTACGAGA GTTACGGACT GGGCAACTCG
TTGCGCTGGG GCCTGCTGCT GGCGGCCGGG ATCGTCTCTC CGTTGTTGGG CGCGAACGCC
CTGATGTCCG GACGCGCGCT GCCGACGTTC GTCGAATTGA TGGGACCGCG CCCCGGCCGC
ACCAGCTCGG TGCTGACGGC GCTGCTGGGA CTCACGTTGC TCGTGACGAC CTTGATCGCG
GCCGAGACCG CGCTGGGCTT CGTCTTCGAT CCCCGCTACC GCGATTTTCC CTTCGCCGCG
CTGACGATGG CGGTGGTGCC GTGCTGGGCG CTGGCGTGGC TCACCCGTCC GCTCGCCGGC
CGCCGCCCGA TCGCGGAACA GGTTTTCGCC GGTCTGCTGG TGATCGCGGC CGTTTATGTC
GGGTTCAACG AAGGTCCGAA AAACTGGCAG TCGCTCTGGA CCTGCGTGGT GTACGCCATG
CTCGGCGTCA CGCTGTGGCG GGCGCGGGCC GCGCAAACCC CGTGA
 
Protein sequence
MSYAPFRGQQ TPLVATTEIP PEQIAEDLAQ LAKISKCVRT YSIENGLDRV PALAAKVGLK 
VIQGIWLGNN RLKNLAQINI AVGLAKEHPD TIIALVVGNE VLLRGEMTAA DLVANIRLVK
SQVTVPVTYA DVWEYWLRNR EVYDAVDFVT IHILPYWEDL PIRARNAAAH VDAIRKRVAA
AFPAKEILIG ETGWPSAGRM REGALPSRTN QARVVSEILD MAKREKFRVN LIEAYDQPWK
RQLEGTVGGN WGLIDATRRK LKYPAGEPIS NFPLWKTQMG AGMALCILVF AVAMLTLRRR
PWTPRPMSWI AVAVSATSAG ILLGVAADKL CYESYGLGNS LRWGLLLAAG IVSPLLGANA
LMSGRALPTF VELMGPRPGR TSSVLTALLG LTLLVTTLIA AETALGFVFD PRYRDFPFAA
LTMAVVPCWA LAWLTRPLAG RRPIAEQVFA GLLVIAAVYV GFNEGPKNWQ SLWTCVVYAM
LGVTLWRARA AQTP