Gene Nham_1769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1769 
Symbol 
ID4032944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1971424 
End bp1971867 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content62% 
IMG OID637970239 
Productpeptidyl-prolyl cis-trans isomerase, cyclophilin type 
Protein accessionYP_577043 
Protein GI92117314 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCCTCG AAACCACACA GGGACCCGTG ACCATCGAGA TGCGTCCCGA TCTCGCTCCC 
GGTCATGTTG CGCGGATCAA GGAGCTGGTG CGTGAAGGCT TCTACGACGG CATCGTCTTC
CATCGCGTGA TCGACGGCTT CATGGCGCAG ACCGGATGCC CCCAAGGCAC CGGGACGGGC
GGCTCGGGCA CGAAACTGAA GGCCGAGTTC AACAACGAAC CGCACGTGCG CGGCACCGCA
TCCATGGCGC GGGCGCAAAG CCCGGATTCC GCCGACAGTC AGTTCTTCAT CTGCTTCGAC
GAAGCGTCGT TCCTGGACCG GCAATATACC GTTTGGGGCA AGGTGACCGA AGGCATGGAG
AACGTCGACA AGATCAAGCG CGGCGAGCCG GTGCAAAACC CCGACAAGAT CGTCAAGGCG
CGTATGGCTG CCGATGCGGC TTGA
 
Protein sequence
MILETTQGPV TIEMRPDLAP GHVARIKELV REGFYDGIVF HRVIDGFMAQ TGCPQGTGTG 
GSGTKLKAEF NNEPHVRGTA SMARAQSPDS ADSQFFICFD EASFLDRQYT VWGKVTEGME
NVDKIKRGEP VQNPDKIVKA RMAADAA