Gene Nham_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1709 
SymbolgltX 
ID4030309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1909832 
End bp1911307 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content61% 
IMG OID637970181 
Productglutamyl-tRNA synthetase 
Protein accessionYP_576985 
Protein GI92117256 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00464] glutamyl-tRNA synthetase, bacterial family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATAAACG GCCTCCGCCG ATACCGTCCT GAAAGGTTCA GATCCCCGAA AATGATTGCA 
TCCGTCGTCA CCCGCTTCGC ACCGTCTCCG ACCGGTTTTC TTCACATCGG AGGCGCCCGA
ACTGCGCTCT TCAATTGGCT CTATGCGCGC AAGCACGGCG GCAAGATGTT GCTTCGGATC
GAGGACACCG ATCGCGCGCG CTCCACGACG GCGGCAATCG AGGCTATCCT TGACGGGCTC
AAATGGCTGG GAATCGACTG GGACGACGAT GTCGTGTACC AGTTTTCCCG CGTCGCACGG
CATCGCGACA TCGCTGAGCA GTTGCTTGCC GAAGGCAAGG CTTATCGATG CTACGCAACG
CCGGAAGAGC TGGCCGAGAT GCGGGAGAAG GCGCGCGCCG AGGGTCGCGC CAAGCTTTAC
GACGGCCGTT GGCGCGACCG CGATCCATCG GAAGCCCCGC CGGATCTCAA ACCGACCATT
CGCCTCAAGG CGCCTCTGAG CGGCGAGACC GTGATAGAGG ATCAGGTTCA GGGGCGTGTT
GTCTGGCAGA ACGAGAACCT CGACGACCTC GTGCTGCTGC GGGGTGACGG CACTCCGACC
TACATGCTCG CGGTCGTGGT CGATGATCAT GACATGGGAG TCACGCACAT CATTCGCGGC
GACGACCACC TCATCAACGC CGCCCGCCAA AAGCAGATCT ACGATACTCT CGGATGGGCT
CTCCCGACGA TGGCCCATAT TCCACTCATC CACGGCCCCG ACGGATCGAA ACTCTCGAAG
CGCCACGGCG CGCTGGGAGT GGATGCCTAC CGCGCCATGG GTTATCTGCC GGCGGCACTC
CGCAACTATC TGGTCCGGCT CGGCTGGAGC CATGGCGATC AGGAGATTTT CTCCACACAG
GAAATGATCG ACGCGTTCGA CCTGTCCGCG ATCGGACGAT CCGCGGCGCG CTTCGACTTT
GCCAAACTCG AAAACCTCAA CGGCCACTAT ATCCGCAATT GTGACGATCA CGTTCTTGTA
GACCTGTTCC AGGATGCGCT CGATTACGTT CCCCGCGGAG CGGACCTCAA GCCGAAACTC
AACGATGCCA CGCGAGCGCA ACTGCTGCGC GCGATGCCCG GACTCAAGGA ACGGGCCAAG
ACCCTGATCG AACTGATCGA CAGCGCCCGG TTTATCTTCG CCGATCGGCC GTTGACACTG
GACGCCAAAG CCATCCCGTT GCTGACCTCG GAGACTCGCG CGCTGATCGG CAGACTCCGC
ACAACGCTTG AAACGGTCAC ATCATGGAGC GCGCAGACCA CCGAAGCCGC GATGCGAACC
TTTGCCGAGC AAAACAATCT GAAGCTCGGC GCCATCGCGC AACCGCTTCG CATCGCCTTG
ACGGGACGAA CGACATCGCC GGGCATATTC GATGTCCTCG CCGTGCTTGG AAAAGAGACG
TGTCTGGCTC GGCTTGACGA CCAAAGCTCG CCGTAA
 
Protein sequence
MINGLRRYRP ERFRSPKMIA SVVTRFAPSP TGFLHIGGAR TALFNWLYAR KHGGKMLLRI 
EDTDRARSTT AAIEAILDGL KWLGIDWDDD VVYQFSRVAR HRDIAEQLLA EGKAYRCYAT
PEELAEMREK ARAEGRAKLY DGRWRDRDPS EAPPDLKPTI RLKAPLSGET VIEDQVQGRV
VWQNENLDDL VLLRGDGTPT YMLAVVVDDH DMGVTHIIRG DDHLINAARQ KQIYDTLGWA
LPTMAHIPLI HGPDGSKLSK RHGALGVDAY RAMGYLPAAL RNYLVRLGWS HGDQEIFSTQ
EMIDAFDLSA IGRSAARFDF AKLENLNGHY IRNCDDHVLV DLFQDALDYV PRGADLKPKL
NDATRAQLLR AMPGLKERAK TLIELIDSAR FIFADRPLTL DAKAIPLLTS ETRALIGRLR
TTLETVTSWS AQTTEAAMRT FAEQNNLKLG AIAQPLRIAL TGRTTSPGIF DVLAVLGKET
CLARLDDQSS P