Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1708 |
Symbol | gltA |
ID | 4030308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 1908386 |
End bp | 1909687 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637970180 |
Product | type II citrate synthase |
Protein accession | YP_576984 |
Protein GI | 92117255 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.693797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCAA CAAGCACAAA AACCGCAACG CTGACGGTCG ACAACACGAC CTATGAGCTT CCCGTTTTGA GTGGCACGGT CGGACCGGAC GTCATCGACA TCGCCAAGCT CTACGCGCAA GCTGGCCTGT TCACTTATGA TCCTGCCTTC ACGTCCACCG CCAGTTGCCA GTCCAAGATC ACCTATATCG ACGGCGACGC AGGCGTGCTC GAATATCGCG GTTATCCGAT CGAGCAGCTC GCAGAAAAAG GCGATTTCCT CGAAACCTGC TATCTGCTGC TCTACGGTGA ACTGCCCACC AAGTCGCAAA AATTCGATTT CGACCAGCGT GTCATTCACC ACACCATGGT TCACGAGCAA ATGACGCGGT TCTTCCAGAG CTTCCGCCGC GACGCTCACC CCATGGCGGT CATGGTAGCT GCGGTCGGCG CACTCGCCGC TTTCTATCAC GACTCCACCG ACATCAACGA TTCCAAGCAG CGCATGATCG CATCCATGCG CATGATCGCG AAAATGCCGA CACTGGCTGC GATGGCCTAC AAATATACCA TCGGCCAGCC GTTCATGTAT CCGAAGAATT CGCTGAGCTT TGCCGAGAAT TTTCTCCAAA TGTGCTTCGC CGTGCCGTGC GAGGACTACG AGATCAACCC CGTCCTGGCG GGTGCGCTCG ACACAATCTT CATCCTGCAT GCCGACCACG AACAGAACGC CTCGACATCG ACCGTGCGCA TCGCGGGTTC GTCGGGCGCG AATCCGTTCG CGTGTATCGC AGCGGGCATC GCCTGCCTGT GGGGACCGGC GCACGGCGGC GCCAACGAGG CGGCGCTGGC CATGCTCTCC GGCATCGGAA CGGTCGACAG GATTCCCGAC TTCATAACGA GGGTGAAGGA CAAGAACAGC GATGTCCGCC TGATGGGCTT CGGACACCGG GTCTACAAGA ACTACGATCC GCGCGCCAAG ATCATGCAGA AGGTGTGTCA CGCGGTGCTC GATGAGACCG GCCACGGCGA CGATCCGATG CTCAAGGTGG CGCTGGAGCT TGAGAAGATC GCCCTGAACG ATCAGTATTT CATCGATCGC AAGCTGTATC CGAACGTCGA TTTCTATTCG GGCATCACGC TGAAAGCGAT GGGCTTCCCG ACCTCGATGT TCACGGTTCT GTTCGCCGTC GCGCGCACTG TCGGCTGGAT CAGTCAGTGG AGCGAGATGA TCGAGGATCC GCAACAGAAG ATTGGCCGCC CGCGGCAGCT TTATACCGGC GCGGCGCGGC GCGATTACGT CGATATGGCC GACCGCAAAT AA
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Protein sequence | MNATSTKTAT LTVDNTTYEL PVLSGTVGPD VIDIAKLYAQ AGLFTYDPAF TSTASCQSKI TYIDGDAGVL EYRGYPIEQL AEKGDFLETC YLLLYGELPT KSQKFDFDQR VIHHTMVHEQ MTRFFQSFRR DAHPMAVMVA AVGALAAFYH DSTDINDSKQ RMIASMRMIA KMPTLAAMAY KYTIGQPFMY PKNSLSFAEN FLQMCFAVPC EDYEINPVLA GALDTIFILH ADHEQNASTS TVRIAGSSGA NPFACIAAGI ACLWGPAHGG ANEAALAMLS GIGTVDRIPD FITRVKDKNS DVRLMGFGHR VYKNYDPRAK IMQKVCHAVL DETGHGDDPM LKVALELEKI ALNDQYFIDR KLYPNVDFYS GITLKAMGFP TSMFTVLFAV ARTVGWISQW SEMIEDPQQK IGRPRQLYTG AARRDYVDMA DRK
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