| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1700 |
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| Symbol | |
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| ID | 4029404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1898607 |
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| End bp | 1899830 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637970172 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_576976 |
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| Protein GI | 92117247 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.449583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGCCG TTCCGTTGAA GAATAACAAG CCGGTTGAGG CTGGCGTCAG GACCGTGACG
GTTCTGGGAG CGACCGGGTC GATCGGCGAC AGCACGATGG ATTTGTTGCG CGGCGCGCCC
GGCCGCTACC GTGTCGAAGC ACTGACCGCG AATTCAAATG TCGAGGCTCT TGTCAAACTG
GCGCGGGAAT TCGCTGCGCG GTTTGTCGCG GTCGCCGATC CCGCGCGTTT TGGCGAGTTG
AAGGATGCGC TCGCGGGCAG TGGTATCGAG TGTGGCGTCG GCGAAAGCGC GATCATCGAG
GCTGCTTCGC GTCCGGCCGA CTGGTTGATG GCCGCGGTGA GCGGCGCGGC CGGACTGAAG
CCCGCGCTTG CAGCGGTTGA TCGCGGGACA ACGATTGCGC TTGCGAACAA GGAGTGCCTC
GTCTGCGCCG GCGACTTCTT CATGCAGCGC GCCGCGAAGG CGGGGGCCTG CATCCTGCCG
GCCGACTCCG AGCACAATGC CCTGTTTCAA GCCTTGAGTT CGGGAAATCG CGATGAACTC
ACGCGCGTCA TCATTACCGC GTCGGGGGGC CCGTTTCGCA CCTGGGCGGC GGCCGACATC
GAGAAGGCGA CCCTGGCGCA GGCGCTGAAG CATCCGAACT GGAGCATGGG ACGGAAGATC
ACCATCGACT CGGCGTCGAT GATGAACAAG GGACTCGAGG TCATCGAGGC CGCCTGCCTG
TTCACGCTGA CGCCGGACGA GATCGACGTC CTGGTTCACC CGCAATCGAT CGTCCACGGT
ATGGTCGAGT TCTCCGACCG GTCCGTCGTC GCTCAACTCG GAACTCCCGA CATGCGGACG
CCGATCGCTC ATTGCCTCGG CTGGCCCGAG CGCATCGTCG GACCGGCGGC GAAGCTCGAT
CTCGCCAGCA TCGGACAGCT GACATTCGAG GCACCGGATT TCACGCGGTT CCCGGCGCTC
CGGCTGGCCT ACGACGCGCT GAGGACGGGG AACGGCGCAA CCACGGTCTA CAATGCCGCA
AACGAGATCG CCGTTGCGGC GTTCATCGGC GAGAAAATCA GGTTCGGCGC CATCGCGCGC
CTGGTCGAGG CCACCATGAA TGGCTGGGTC CGGGCAGGCA ATCTCGCGCC GCTGGCGTCG
GCTGACGACG CCATCGCCAT TGACCACAAC GCGCGAAATA TGGCCGCGTC GCTATTGCCA
CAAATCGCCG CAAAGGCCAC CTAA
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| Protein sequence | MGAVPLKNNK PVEAGVRTVT VLGATGSIGD STMDLLRGAP GRYRVEALTA NSNVEALVKL
AREFAARFVA VADPARFGEL KDALAGSGIE CGVGESAIIE AASRPADWLM AAVSGAAGLK
PALAAVDRGT TIALANKECL VCAGDFFMQR AAKAGACILP ADSEHNALFQ ALSSGNRDEL
TRVIITASGG PFRTWAAADI EKATLAQALK HPNWSMGRKI TIDSASMMNK GLEVIEAACL
FTLTPDEIDV LVHPQSIVHG MVEFSDRSVV AQLGTPDMRT PIAHCLGWPE RIVGPAAKLD
LASIGQLTFE APDFTRFPAL RLAYDALRTG NGATTVYNAA NEIAVAAFIG EKIRFGAIAR
LVEATMNGWV RAGNLAPLAS ADDAIAIDHN ARNMAASLLP QIAAKAT
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