Gene Nham_1666 details

Gene Information

• Locus tag: Nham_1666
• ID: 4032919
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 1865103
• End bp: 1865819
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637970139
• Product: OmpA-like transmembrane region
• Protein accession: YP_576943
• Protein GI: 92117214
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3637] Opacity protein and related surface antigens

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.316651
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAAAT TCTTGCTCAC CGCTGCGGCG GTTGCAGCCT TCGCCGCACC GGCGCTTGCG 
GCCGATCTTC CGCCGCGGCC CTATACCAAG GCGCCCCCGC CCTATACGCC GCCACAGGCC 
GTCTACAACT GGACCGGCTT CTACATCGGC GGTCATCTCG GTGGTGCGTT CGGAGGCGAC 
AGCAGCCTGA GTGGAAGCGA CGGCCGTTTC CTCGGCGGCG TGCAGGGCGG CGCCGATTAC 
CAGTTCGCGA ACAACTGGGT GCTCGGCGCC GAGGCCCAGT ATAGCTGGCT CACCAACAAC 
AACGGCGGCG CGGTCTTCCC GGGCGGCAAC ATCGTGACCG GCAACGACCG CGGCCTCGGC 
TCGGTGACCG GCCGGCTCGG CTACGCCTGG GGGCCGACAC TTCTGTATGC CAAGGGCGGC 
TATGCGTTCC GGGACAGCAG GCTCGGCGTG ACCGACGCCG CAGGCGTGCC GCTGGCTTTC 
GCAACCACCG GAAATCGTGA CAACGGTTAC ACCGTCGGCG CCGGCCTCGA ATACATGTTC 
GCGCCGAACT GGTCCGCCAA GGTGGAGTAT CAGTATTATA ATTTCGGCAA AACGACATTC 
GCCGCGGGTT CGCCGACCGA TATCGTCGGA ACGAGCTTCC GCAACGACGA TCACACCGTC 
AAGGCGGGCC TGAACTATCG CTTCGGCTGG GGCGGGCCGG TGGCCCCTCA TTATTGA 

 

Protein sequence

MKKFLLTAAA VAAFAAPALA ADLPPRPYTK APPPYTPPQA VYNWTGFYIG GHLGGAFGGD 
SSLSGSDGRF LGGVQGGADY QFANNWVLGA EAQYSWLTNN NGGAVFPGGN IVTGNDRGLG 
SVTGRLGYAW GPTLLYAKGG YAFRDSRLGV TDAAGVPLAF ATTGNRDNGY TVGAGLEYMF 
APNWSAKVEY QYYNFGKTTF AAGSPTDIVG TSFRNDDHTV KAGLNYRFGW GGPVAPHY