Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1587 |
Symbol | ihfA |
ID | 4033064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 1790844 |
End bp | 1791176 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637970062 |
Product | integration host factor subunit alpha |
Protein accession | YP_576868 |
Protein GI | 92117139 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.526192 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGGAA GCGGAAAAAC AGTCACTCGT GTCGATCTCT GCGAAGCCGT CTACAAAAAG GTGGGACTGT CGCGGACCGA GTCGTCCGCG TTCGTGGAGC TCGTTCTCAA GGAGATCACC GACTGCCTGG AGAAGGGCGA GACGGTGAAG TTGTCGTCGT TCGGGTCGTT CATGGTGCGC AAGAAAGGCC AGCGTATCGG CCGCAATCCC AAGACCGGCA CGGAGGTTCC GATCTCTCCG CGTCGCGTGA TGGTATTCAA GCCGTCGGCT ATTCTGAAGC AGCGGATCAA CGGTAACAGC AACGGCAACG GCGCCGACAC CAAGGCTGAC TAG
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Protein sequence | MTGSGKTVTR VDLCEAVYKK VGLSRTESSA FVELVLKEIT DCLEKGETVK LSSFGSFMVR KKGQRIGRNP KTGTEVPISP RRVMVFKPSA ILKQRINGNS NGNGADTKAD
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