| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1548 |
|---|
| Symbol | rplB |
|---|
| ID | 4030702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 1760773 |
|---|
| End bp | 1761606 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637970024 |
|---|
| Product | 50S ribosomal protein L2 |
|---|
| Protein accession | YP_576830 |
|---|
| Protein GI | 92117101 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0090] Ribosomal protein L2 |
|---|
| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTTA AGACATTCAA TCCAACGACG CCGGGCCAGC GCCAGCTGGT GATGGTCGAT
CGCTCCGCCC TCTACAAGGG CAAGCCGGTC AAGGCGCTTA CCGAGGGAAA GCGCGGCAAG
GGCGGCCGCA ACAACACCGG GCGCATCACC GTGCGGTTTC GCGGCGGCGG CCACAAGCAG
GCCTACCGCA ACGTCGATTT CAAGCGCGGC AAGGAGGATG TGCCGGCGAT TGTCGAGCGG
CTCGAATACG ACCCGAACCG CACCGCGTTC ATCGCGCTGA TCAAGTATCA GGACGGCGAG
CAGGCCTATA TTCTCGCGCC GCAGCGTCTG GCCGTCGGCG ACACCGTCGT TGCCGGCAAC
TATGTCGACG TCAAGCCGGG CAATGTCATG CCGCTCGGCA ACATGCCCGT GGGTACCATC
GTCCATAATG TCGAGATGAA GATCGGCAAG GGTGGTCAGC TCGCGCGGTC CGCCGGCACC
TATGCCCAGA TCGTCGGTCG CGACCACGAC TACGTCATCC TGCGCCTGAA TTCGGGCGAG
CAGCGCCTGG TGCACGGCCG TTGCCGCGGC GCCATCGGCG CGGTGTCGAA TCCGGATCAC
ATGAATACCT CGATCGGCAA GGCGGGCCGC ACCCGCTGGA TGGGCCGCCG CCCGCACAAC
CGCGGCGTGG TCATGAACCC GATCGACCAT CCGCATGGCG GTGGCGAAGG CCGCACCTCG
GGCGGCCGTC ATCCGGTGAC GCCGTGGGGC AAGCCGACCA AGGGTAAGAA GACTCGTTCC
AACAAGTCGA CCAACAAGTT CATTCTCATC AGCCGCCACA AGCGGAAGAA GTAG
|
|---|
| Protein sequence | MALKTFNPTT PGQRQLVMVD RSALYKGKPV KALTEGKRGK GGRNNTGRIT VRFRGGGHKQ
AYRNVDFKRG KEDVPAIVER LEYDPNRTAF IALIKYQDGE QAYILAPQRL AVGDTVVAGN
YVDVKPGNVM PLGNMPVGTI VHNVEMKIGK GGQLARSAGT YAQIVGRDHD YVILRLNSGE
QRLVHGRCRG AIGAVSNPDH MNTSIGKAGR TRWMGRRPHN RGVVMNPIDH PHGGGEGRTS
GGRHPVTPWG KPTKGKKTRS NKSTNKFILI SRHKRKK
|
|---|
| |