Gene Nham_1546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1546 
SymbolrplD 
ID4030700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp1759831 
End bp1760451 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content66% 
IMG OID637970022 
Product50S ribosomal protein L4 
Protein accessionYP_576828 
Protein GI92117099 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTGA ACGTCACCAC CCTCGAAGGC AACGCCGCGG GCTCGGTCCA ACTCTCGGAC 
GGGATTTTCG GCCTGGAGCC GCGCAAGGAT CTGATCCAGC GCTGCGTCAA CTGGCAGCTC 
GCCAAGCGTC AGGCCGGCAC CCACAAGACC AAGGGCCGCG CGGAAATCTG GCGCACCGGC 
AAGAAGATGT TCAAGCAGAA GGGCACCGGC AATGCCCGTC ACGGCTCGGC CCGCGTGCCG 
CAGTTCCGTG GCGGTGGCCG CGCGTTCGGC CCGGTCGTTC GCAGCCATGC CCACGATCTG 
CCGAAGAAGG TGCGCGCGCT GGCGCTGCGC CACGCACTGT CGGCGAAGGC CAAGGACGGC 
GGTCTAATCG TCATCGACAG CGCTGAACTG AATGAGGCCA AGACCAAGGC CTTGGTGGGC 
CACTTTTCCG GCCTCGGCCT GACCAACGCG CTGATCGTGG ACGGCGCCGC GGTCCATGCC 
GGGTTCGCGA CCGCCGCGCG CAACATTCCG AACATCGACG TGCTGCCGAT CCAGGGCATC 
AACGTTTACG ACATCCTGCG CCGTCGGAAA CTGGTGCTGA CCAAGGCGGC GGTTGATGCG 
TTGGAGGCGC GCTTCAAATG A
 
Protein sequence
MELNVTTLEG NAAGSVQLSD GIFGLEPRKD LIQRCVNWQL AKRQAGTHKT KGRAEIWRTG 
KKMFKQKGTG NARHGSARVP QFRGGGRAFG PVVRSHAHDL PKKVRALALR HALSAKAKDG 
GLIVIDSAEL NEAKTKALVG HFSGLGLTNA LIVDGAAVHA GFATAARNIP NIDVLPIQGI 
NVYDILRRRK LVLTKAAVDA LEARFK