Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1469 |
Symbol | |
ID | 4032870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 1668373 |
End bp | 1669983 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637969943 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_576751 |
Protein GI | 92117022 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.997673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACCC CCGCAGATAA ACCTGAAGTC GTCCAGCTTC CGGTCGCCCC CGCGATTGTA CCGTCCGCAC GCAATCGCCG CGCCGCGACG CAACGGGTCC GTGAGGCACG GGACCGGTTG ACCTCGACCA GCGGAACCCG CCCGGCATTC GATCACGAAC TGCTTCGGCA ATACGCGCAA ACACGGCTGT CAGCATCGCT CGTCGTGATG CTGCTTGTGG TCGCGACCGG CGTGCTGTTC GGCTTCTGGA TGGAGCCCGC CTCGGCGGCG GTATGGACGT TCGGGATGCT CTGCATCCAC GCCGTAACCA TCTACAACTG CAACAATTAC CTCAAGGAGC CATCGTCCCC CAACAGCACG CGCAAATGGC GCGCGCGTTT CATCCTGCTC GATCTTTTGT ACGGCCTGTG CTGGACGACG ATCCTGGTTC ATCCCGCCGG TTTTGACCCG GTCACCAATA CCCTGATGAT GTTTCTGATG CTGCTGGTCG TGGCGGTATC GAGCATGCTC GCCGCCAGCC TGCCTATTGC CGCCTTTGCC GCAACCGCCC CGGTGACCTC GGCGATCGCG CTGAAGTTTG TGATCGGCGG CAGCTTCAAC AACTACATTC TCGCCGTTCT CGCGTTGGCC GCGGAGGGTT ACTTCGCGTT GCTCGCGCAT CGCCTGCATT CCACGACGCT GGCGACACTC GAGGCGCGCG CGGAAAAGGA CGCCCTGATC GGTGAACTCG AGCAGGCCAA GGCCATTTCG GATGAAGCGC GACATCGCGC GGAATCAGCC AACGTCGCAA AATCACGATT TCTCGCGCAA ATGAGTCACG AACTGCGGAC GCCGCTGAAC GCCATTCTCG GATTCTCCGA AGTGATGAAG AGCGAGATTT TCGGCGAGCA CGCGGTCGCG GTCTACAAGA GCTATTCGGC CGACATTCAT AATTCCGGCG TTCACCTGCT GAATCTGATC AACGAGATCC TCGACCTGTC GCGGATCGAG GCCGGCCGTT ACGAACTCAA CGAAGAAGCA GTGTCTCTGG TCCATGTCGT GGCGGACTGT CACCACTTGC TGAAGCTGCG AGCCTCCAGC CGCGGCATCA CCATTCATGA GGTATTCGAA CACGGTATGC CGCGCATCTG GGGCGACGAG CGCGCCACGC GCCAGATCGT GCTCAATCTG TTGTCGAATT CGATCAAATT CACTCCACAG GGCGGGGAGA TCTGGCTGAA GGTCGGATGG ACCGCTTCAG GCGGGCAATA CCTCAGCGTC AAGGACAGCG GTTCCGGGAT CGCGGAAGAC GAAATTCCGA TCGTGCTAGC GTCGTTCGGG CAAGGGACGA ATTCGATCAA ATCCGCAGAG CAAGGCGCGG GTCTCGGATT GCCGATCGCA AAGAGCCTGA TCGACATGCA CGGCGGTACG TTCACCCTGC GGTCCAAGCT CCGGGTCGGC ACCGAGGTCA TCGTCACCTT TCCACCGGAG CGCGTGATGT CCGCTCTCGC GCCGATGGCC GAGGAAGCTC CGCCGATTCA ACCCGCTGAA ACGGCCGACC CGGCAGCGGA TGCGAGACGC CGCCTGCGGA ACAAGCCGAT CATGAATGCC GGCACGGGTC TTAGAGCATG A
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Protein sequence | MSTPADKPEV VQLPVAPAIV PSARNRRAAT QRVREARDRL TSTSGTRPAF DHELLRQYAQ TRLSASLVVM LLVVATGVLF GFWMEPASAA VWTFGMLCIH AVTIYNCNNY LKEPSSPNST RKWRARFILL DLLYGLCWTT ILVHPAGFDP VTNTLMMFLM LLVVAVSSML AASLPIAAFA ATAPVTSAIA LKFVIGGSFN NYILAVLALA AEGYFALLAH RLHSTTLATL EARAEKDALI GELEQAKAIS DEARHRAESA NVAKSRFLAQ MSHELRTPLN AILGFSEVMK SEIFGEHAVA VYKSYSADIH NSGVHLLNLI NEILDLSRIE AGRYELNEEA VSLVHVVADC HHLLKLRASS RGITIHEVFE HGMPRIWGDE RATRQIVLNL LSNSIKFTPQ GGEIWLKVGW TASGGQYLSV KDSGSGIAED EIPIVLASFG QGTNSIKSAE QGAGLGLPIA KSLIDMHGGT FTLRSKLRVG TEVIVTFPPE RVMSALAPMA EEAPPIQPAE TADPAADARR RLRNKPIMNA GTGLRA
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