| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1449 |
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| Symbol | |
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| ID | 4032850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 1637015 |
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| End bp | 1639342 |
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| Gene Length | 2328 bp |
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| Protein Length | 775 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637969923 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_576731 |
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| Protein GI | 92117002 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00109411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGCG CTCAGGCGGC GAGCCCGTGC GCTCAATCCG ATTCGATCAA GGGATTGGCG
CAATCGATCG CAAAACCTGC CTACCGCAGG CTGCTGATCG CCGAGCCTGT GCTTCGCCGC
GCCGTCCCTG CCCTGATCAT CGCTTTCCTG TTAACGATTT GTGTCGGCGC CCTGGTGCAG
GTCATCGACC AGACCCGGCA AAAACAGGCA ATGACGAAAC ACGATCTGCT GGCGCTCGCC
GATCTGCTTG CCGAGCGGCT TGAGCATGTT GGCGTCATCC ATCAGGATCG CCCCGCCTCC
ATCGAACGTC TCCAGAACCT GTTGCCAAGC CTCATTCCAT CCTGGGGTAT CGCCGCCGGC
CGCCATGTCA TCGTCACCGG CGCCGATCAG CGCGTTCTCG CGCGGGTGCC GATCGAGGCG
GCGCCCGGCG AGAGCAGCCG GATTCTGGAG CTCATCAGCA CCGCGCAATC GCCGGCCCTG
CGTGGCATGT CGTCCGCCAG CGTCGCCGAC ATCATCCTGC TCGACGGCAG CGGCGCGCTC
GCGACCCAGC GTGTGGTCAG ATCATTGCTG GGCCATGTCA CCGTTATCCA GGAAAAGACC
GATTCAGTGT GGCGCCCGGA CACTGCGCTG TCGATCACGC TGTCGGCCAC CACCGGATTC
GTGGTCCTGA TCCTGGGCTT TGCATTTCAC TGGCAATCCA CCCGCGCGCG CGAGGGCGAT
GTCATCAATG ACGCGGTCCG CGGTCGCATC GATACCGCGC TCAACCGCGG TCGATGCGGT
CTTTGGGACT GGGATCTGTC GCGCGGGCGG ATATTCTGGT CGCAATCGAT GTTCACCATG
CTCGGGCTGG AAAGCCGCAG CGACCTGCTC ACCTTCGGGG AGATCAGCGC GCTGGCCAAT
CCCGACGACA TCGACCTGTT CGCAATCGGG GATCAGCTCA TCTCTGGGAA AATCCATCAT
ATCGACCAGA GTTTCCGGAT GCGGCACAGC GGCGGTCACT GGATCTGGTT GCGCGTCCGT
TGCGAACTCA GTCAGGGTGC GGGCGACGGT GCCGCTCATC TGATCGGGAT TGCCGTCGAC
ATCACCGAAC AAAAGAGCCT CGCCGAGAAA ACCGTCGAAG CCGATCTTCG GCTGCGGGAC
GCGATCGAAA CCATCCCCGA GGCCTTTGTG CTGTGGGATG CCGACGACCG TCTGGTCCTT
TGCAACTCTC ACTTCCAGCG CCTGCACAAG CTGCCCGAGA GCGCGGTCGC GGCCGGCACC
TCCTACGAGA CCGTGATCGA GGTCGGCCGC ATGCACGAAA TTTGCGCACG GCCACCCGAA
ACCGGCACAA CCGCTCCGGG CGCGCGGACC TTCGAAGCGC AGCTCGATAA CGGCTGCTGG
CTTAACATCA GCGAACGCCG CACCAAGGAC GGCGGTTATG TGTCGGTCGG AACCGACATC
ACCCGGATCA AGGAGCACGA ACAAAAGCTC GTCGACAACG ACCTCCGGCT GCGGGCGACC
GTCATCGATC TGAAACGGAC GCAGGCGACG CTCGAACAAC AGGCGATCGA GCTTGCGGAC
CTTGCGCAGA AATACGCGAA GGAGAAAGAT CGCGCCGAGG ACGCCAATCG AGCGAAATCA
AAATTCCTCG CCAACATGAG TCACGAACTG CGAACGCCGC TCAATGCCAT CATCGGATTC
TCCGAGATCA TGAGCAACGG CATGTTCGGC ACCCTCGGCT CGGAGAAGTA CAGCGAATAT
TGCCACGACA TCCTGACCAG CGGCCAATAT CTGCTCGAGG TCATCAACGA CGTCCTGGAT
ATGTCCAAGA TCGAAGCCGG CCGCATGAAA CTCGACATGG AGCCGCTCGA TCTCTCCAGG
ACGCTGGCGG AATCGCTGCG GGTCGTCACA GGCCGCACCA GCGACAAGAA GCTGACTTTC
GACGTCCGGA TCGACGATGA CATTGCCATC ACTGCCGACC ATCGCGCGGT CAAGCAGATC
ATCGTCAATC TGCTGTCCAA TGCCGTGAAG TTCACGCCCG ATGGCGGACG AGTCATGGCG
CGAAGCCAGG TGTTTGCGAA TTCCGTTGCC CTGACGATTG CCGACACCGG CATCGGCATC
GCGCCGCATT CGCTGCGAAA ACTGGGCAAA CCGTTCGAAC AGGTCGAAAG CCAGTTGACC
AAAACCTATG CGGGATCGGG GCTCGGGCTG GCGATCGCCA AATCGCTGGT CAACCTGCAC
GGCGGGTCGA TGCGGCTTCG CTCGAAGCCC GGAACGGGAA CCGTCGTCCG CGTCACCCTG
CCCCGTCACG GCCGCCTGGA CAATCCCGCC GCCAGCGCCG CCGCTTAG
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| Protein sequence | MARAQAASPC AQSDSIKGLA QSIAKPAYRR LLIAEPVLRR AVPALIIAFL LTICVGALVQ
VIDQTRQKQA MTKHDLLALA DLLAERLEHV GVIHQDRPAS IERLQNLLPS LIPSWGIAAG
RHVIVTGADQ RVLARVPIEA APGESSRILE LISTAQSPAL RGMSSASVAD IILLDGSGAL
ATQRVVRSLL GHVTVIQEKT DSVWRPDTAL SITLSATTGF VVLILGFAFH WQSTRAREGD
VINDAVRGRI DTALNRGRCG LWDWDLSRGR IFWSQSMFTM LGLESRSDLL TFGEISALAN
PDDIDLFAIG DQLISGKIHH IDQSFRMRHS GGHWIWLRVR CELSQGAGDG AAHLIGIAVD
ITEQKSLAEK TVEADLRLRD AIETIPEAFV LWDADDRLVL CNSHFQRLHK LPESAVAAGT
SYETVIEVGR MHEICARPPE TGTTAPGART FEAQLDNGCW LNISERRTKD GGYVSVGTDI
TRIKEHEQKL VDNDLRLRAT VIDLKRTQAT LEQQAIELAD LAQKYAKEKD RAEDANRAKS
KFLANMSHEL RTPLNAIIGF SEIMSNGMFG TLGSEKYSEY CHDILTSGQY LLEVINDVLD
MSKIEAGRMK LDMEPLDLSR TLAESLRVVT GRTSDKKLTF DVRIDDDIAI TADHRAVKQI
IVNLLSNAVK FTPDGGRVMA RSQVFANSVA LTIADTGIGI APHSLRKLGK PFEQVESQLT
KTYAGSGLGL AIAKSLVNLH GGSMRLRSKP GTGTVVRVTL PRHGRLDNPA ASAAA
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