| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1415 |
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| Symbol | |
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| ID | 4032333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1599481 |
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| End bp | 1600734 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637969889 |
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| Product | phage major capsid protein, HK97 |
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| Protein accession | YP_576697 |
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| Protein GI | 92116968 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4653] Predicted phage phi-C31 gp36 major capsid-like protein |
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| TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTTCG ATATCACTGA CACCGCGCCG GAGCACAAGT CCGGCATCGC CGCGCGCGGC
GACTACGACG ACTTCCGCAC GACCTTCGAG GAGTTCAAAT CCGCTAACGA CGAACGTCTG
GCGCGGCTGG AGAAAAAGCG CGGCGACGTG CTGCTGGAGG AAAAGGTCGA CCGCATCAAT
GCCGCGCTCG ACGCCCAGCA CAAGCGCATG GATGAGCTGG CTCTGAAGCA CGCGCGCCCG
GCGCTCGAAG GCCGCAGCCG CATAGCCAGC GACGCGGCGT CCCGCGAGCA CAAGAGCGCG
TTCGAGGCTT ATGTGCGCGG TGGCGAGGCG GGTGCCTTGC GCGACCTGGA GACCAAGGCG
ATGTCGGCCG GCTCCAATGC GGATGGCGGC TATCTCGTTC CGGTCGAACT CGAACACGAG
ATCGGCGAGC GACTGGCGGC AATCTCGCCG ATCCGCGCGC TCGCGTCGGT GCGCACCATC
TCGGGCAATG TCTACAAGAA GCCGTTCATG ACCGCAGGGC CGGCCACCGG CTGGGTCGGC
GAGACGGACT CGCGGACGCA GACCACCTCG CCGACGCTGG ACGCGCTGAG CTTCCCGGCG
ATGGAGCTTT ACGCCATGCC AGCGGCGACC GCGACGCTGC TCGACGATAG CGCCGTCAAC
ATCGACGAGT GGATCGCGCA GGAGGTGGAG CTGACGTTTG CGGTGCAGGA AGGCGCGGCC
TTCGTCAACG GCGACGGCAC CAACCAGCCG AAGGGTTTTC TGCAATCGGA TACGGTGGCG
AACGGCTCGT GGGTGTGGGG CAAGCTCGGC ACTATCGCCA GCGGCGGCGC GAGCGGTTTC
GCGGCGTCGA ATCCGTCCGA TGCGCTGGTG GACCTGATCT ACGCGCTGAA GGCCGGCTAT
CGCCAGAACG CCACCTTCGT GATGAACCGC AAGACGCAAG CCGCGATCCG TAAGTTCAAG
GACACCGGCG GGGCGTATCT GTGGCAGCCG CCGGCGCAGG CGGGCGGGCG CGCCTCGCTG
ATGACGTTCC CGCTGGTCGA GGCCGAGGAC ATGCCGGACG TCGCGGCGAA TTCGCTGTCG
ATTGCGTTCG GCGATTTCCG CCGCGGTTAC CTCGTGGTGG ATCGCGCCGG CGTGCGCGTG
CTGCGCGATC CGTACTCGGC CAAGCCTTAC GTGCTGTTCT ACACGACGAA GCGCGTCGGC
GGCGGCGTGC AGGACTTCGA CGCCATCAAG TTGATGAAGT TCGCAGCGAG TTGA
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| Protein sequence | MDFDITDTAP EHKSGIAARG DYDDFRTTFE EFKSANDERL ARLEKKRGDV LLEEKVDRIN
AALDAQHKRM DELALKHARP ALEGRSRIAS DAASREHKSA FEAYVRGGEA GALRDLETKA
MSAGSNADGG YLVPVELEHE IGERLAAISP IRALASVRTI SGNVYKKPFM TAGPATGWVG
ETDSRTQTTS PTLDALSFPA MELYAMPAAT ATLLDDSAVN IDEWIAQEVE LTFAVQEGAA
FVNGDGTNQP KGFLQSDTVA NGSWVWGKLG TIASGGASGF AASNPSDALV DLIYALKAGY
RQNATFVMNR KTQAAIRKFK DTGGAYLWQP PAQAGGRASL MTFPLVEAED MPDVAANSLS
IAFGDFRRGY LVVDRAGVRV LRDPYSAKPY VLFYTTKRVG GGVQDFDAIK LMKFAAS
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