| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1403 |
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| Symbol | |
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| ID | 4032321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 1588509 |
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| End bp | 1590791 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637969877 |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_576685 |
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| Protein GI | 92116956 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCAACA TCCTGCCCTC CGATTGGAAA AAGCGAATCC GGCATGTCCT GCTGGACTTC
GATGCGCGCA TCGATTCGAC GCTGTTCTCC TCGGCGGTGG GCGCGCGCGA ACTTTACGAG
CGCTTCTCCA CCTTCATGGA CCGCTTCTAT GTCGGCCGCT GGAAACGCTG GGTGTTCGTC
GAGCCGTTGT CGGAAGCCGC AACGCTCGGC CTCGGCGGTC TCATCGTCCT GCTGGCGCTG
GCGCAGCCGG CGTTCCGCGA AACCGCGGAC GAGGACTGGC TGAAGAAATC CGATCTCGCG
GTCACGTTCC TCGACCGCTA CGGCAACCCG ATCGGCAGCC GCGGCATCAA GCACAACGAT
GCGATACCGC TGGAAGATTT TCCCGACAAC CTGATCAAGG CGACGCTCGC GACCGAAGAC
CGCCGCTTCT ACGATCACTT CGGCATCGAC GTCGGCGGCA CCTTCCGCGC GCTGGTGACC
AACGCGCAGG CCGGCGGCGT GCGGCAAGGC GGTTCCTCGA TCACCCAGCA ACTCGCGAAA
AACCTGTTCC TCTCCAACGA GCGCACCATC GAGCGCAAGA TCAACGAGGC CTTCCTCGCG
ATCTGGCTGG AAACCCGACT GACCAAGAAC GAAATCCTGA AGCTGTATCT CGACCGCGCC
TACATGGGCG GCGGCACCTT CGGCGTCGAC GGCGCGGCGC ATTTCTACTT CAACAAGTCG
GTGCGCGACG TCAATCTCGC CGAAGCCGCG ATGCTCGCCG GCCTGTTCAA GGCGCCGACC
AAATACGCGC CGCACATCAA CCTGCCCGCC GCCCGTGCCC GCGCCAACCA GGTGCTCGAC
AACATGGTCG ATGCGGGCTT CATGACCGAG GGCCAGGTGT TCGGTGCGCG GCGCAACCCC
GCCACCGCAG TCGACCGCCG CGACGAGAAC TCGCCGAACT ACTATCTCGA CTGGGCCTTC
GACGAGATGC GCAAGCTGGT CGATACGTTT CCGCGCTCCT ATACCGAGCG CGTGTTCGTG
GTGCGCACCG CCATCGACAT GAATGTGCAG CACGCAGCAG AAGAGGCGAT CGAGAACCAG
TTGCGCCAGT TCGGCCGCGA CTATCACGCG ACCCAGGCCG CCACCGTGGT CGCGGATCTC
GACGGCGGCG TGCGCGCGAT GGTCGGCGGT CGCGATTACG GCGCCAGCCA GTTCAATCGC
GCGACCGACG CCATGCGCCA GCCCGGATCG TCGTTCAAGC CGTATGTCTA CACCACCGCG
CTGCTCAACG GCTTCAAGCC GACCTCCACG ATCGTCGACG GCCCCGTCTG CCTCGGCAAC
TGGTGCCCGC AGAACTACGG TCATTCCTAC TCCGGCAAGG TGACATTGAC CCAGGCGCTG
ACCCGCTCGA TCAATGTCAT CCCGGTGAAG CTGTCGATCG CGCTCGGCGG CAACCCACGC
AACGTCTGGG CCAGCGCCAA GAAGGGCCGG CAAATGATCG TCGAGACGGC GCACAAGTTC
GGCATCGTCA CGCCGCTGCC CGATACGCCC TCGCTGCCGA TCGGCGCCGA CGAGGTCAAC
GTGCTCGAAC ACGCCGTCGC CTATGCCACG TTCCCGAACA AGGGCAAGGC GGTCACGCCG
CACGCGGTTC TGGAAGTCCG CACCGGCGCC GGCGATCTGG TCTGGCGCTA CGACCGCGAT
GGCCCCAAGC CGCGCCAGAT CATTCCACCC TCGGTCGCCG CCGATATGGC GATGATGATG
AGCCACGTGG TCAGTGAAGG CACCGCGCGG CGCGCCATCC TCGACGGCAT TCCGGCGGCG
GGCAAGACCG GCACCACCAA CGCCTACCGC GACGCCTGGT TCGTCGGCTA CACTGGCAAC
TTCGTGTGCG GAGTCTGGTA CGGCAACGAC GACTACTCGC CGACCAACCG CCTGACCGGT
GGTGCGCTGC CTGCCCAGAC ATGGCATGAC ATCATGACGG CCGCGCATCG CGGCGTCGAA
ATCAAGGACA TTGCCGGTGT TGCGGCGCCG GCGAAACCGA CCGCTGCCGC CGCCAAAACC
GCAGGCAGCG AAGACAATGC AAATCCCGCG CCGCCGCCCA TCCTGACCAA GCGCGGCGCC
GAGATCCTGG TGCGCGTGGA AAAGATGCTG GATCAAGCAG GCAAGACAAT CGGAAAAACC
TCGGCCGCCG AACCGGTCAA TCCAGCTCCC TCCGGCGCGC CTCGCCCCGT TTCGACCGGC
GCCGACAACC TCGCGGCCGC AACGTCCGGC GACCGAGCGA CGCTGTCGCC TCCCAAGAAC
TAG
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| Protein sequence | MRNILPSDWK KRIRHVLLDF DARIDSTLFS SAVGARELYE RFSTFMDRFY VGRWKRWVFV
EPLSEAATLG LGGLIVLLAL AQPAFRETAD EDWLKKSDLA VTFLDRYGNP IGSRGIKHND
AIPLEDFPDN LIKATLATED RRFYDHFGID VGGTFRALVT NAQAGGVRQG GSSITQQLAK
NLFLSNERTI ERKINEAFLA IWLETRLTKN EILKLYLDRA YMGGGTFGVD GAAHFYFNKS
VRDVNLAEAA MLAGLFKAPT KYAPHINLPA ARARANQVLD NMVDAGFMTE GQVFGARRNP
ATAVDRRDEN SPNYYLDWAF DEMRKLVDTF PRSYTERVFV VRTAIDMNVQ HAAEEAIENQ
LRQFGRDYHA TQAATVVADL DGGVRAMVGG RDYGASQFNR ATDAMRQPGS SFKPYVYTTA
LLNGFKPTST IVDGPVCLGN WCPQNYGHSY SGKVTLTQAL TRSINVIPVK LSIALGGNPR
NVWASAKKGR QMIVETAHKF GIVTPLPDTP SLPIGADEVN VLEHAVAYAT FPNKGKAVTP
HAVLEVRTGA GDLVWRYDRD GPKPRQIIPP SVAADMAMMM SHVVSEGTAR RAILDGIPAA
GKTGTTNAYR DAWFVGYTGN FVCGVWYGND DYSPTNRLTG GALPAQTWHD IMTAAHRGVE
IKDIAGVAAP AKPTAAAAKT AGSEDNANPA PPPILTKRGA EILVRVEKML DQAGKTIGKT
SAAEPVNPAP SGAPRPVSTG ADNLAAATSG DRATLSPPKN
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