| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1374 |
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| Symbol | |
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| ID | 4031845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 1558506 |
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| End bp | 1560380 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637969850 |
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| Product | cyclic nucleotide-binding domain-containing protein |
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| Protein accession | YP_576658 |
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| Protein GI | 92116929 |
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| COG category | [R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
[COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.138128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACGCCGG AAACCGATCC CGATCTTCAG CAACGCGACG CGCTGCTCCA GACCGTCCTT
CGCGGCTATT TTGCGTCCGC CAACGCCGGG ATCCTGCGCA CCATCCAGTC CGAGGCCGAA
TATGTCCACC TCGCCTCCGG CGCGACCCTG CTGCGCCAGG GCGACCTCAG CGACGACGTG
TACCTCGTCG TGTCCGGGCG GCTGCAAGCC TTTTCCGAAA CTGAATCCGG CGTACGGAAA
ATTCTGGGCG AGATCGGGCG CAGCGAGACC GTCGGTGAGC TCGCGCTGCT CACCGGCGAG
CCGCGCCCGG CGACGGTGGT GGCGGTGCGC GATACCTTGC TGGTCAAAGT GACGCGCGCG
ACGATCGAGC GCGCGATCAT GCAGGATCCA AAAATCGAAA TGTCGATGAT GCGGACCGTG
ATCCGGCGAT TCCGCCACGG CGAGCGCGAG CGCGAGGCGC CCCTGGTACC GGTCAACGTC
TGCATCCTGC CGGTCACGTC CGGGCTGGAT GCCGCCGATT TCGCGCAGAG CCTGCGCGAC
GCGCAAGCCG CAGAGGCAAG GCCGGTGACA GTGGTCACCG CCGATGACAT CGCCGAGCGT
TTCGGCACCA CCCCGGTCCA CCCGGCCGGA CGGCGCCACG ATGCGCTTGC CGGCTATATC
GACGAGATCG AGGCCCGGAG CCGCGCAGTC TATCTCGCCG CCGACGGCCA CGACACCGCA
TGGACCCGTT TCTGCCTGCG TCATGCCGAC GAGATTCTGC TGCTTGCCGA CGCCGATCGC
GATCCCGGCC GGTCCATGGT CGAGCGGGCC TGCCTGTCGC CGGTAGGCTC CATCTCGATC
GCGCGGCAGA CGCTGGTCCT GCTGCACAAG GCCGATACGA CCATTCCAAC CGGCACGGCG
CGATGGCTGG ATGCGCGGCC GGCTGCGCGG CACTTTCACA TTCGTCCGCA GTTGCCGAGC
GACATGCGTC GCATCGCTCG CATCGTCTCC GGACGCGGCA TCGGGCTCGT GCTGTCGGGC
GGCGGCGCGC GCGGCTTCGC CCATATCGGG GTCATCAAGG CGCTGGAAGA AGCCGGCATT
CCCGTCGACA TGCTCGGCGG CAGTTCGATC GGCGCTGTCA TGGGCATGGT GCTGGCGCTC
GGACGCAGCG CGGACGAGGT CGCGGCCGCC GTCCGCAAGG CATTTCCCCT GCATCCGACG
GGCAACGTGA CCGGCGACTA CAACTTCATC CCGCTGGTGT CGCTGATCAA GGGTGCACGC
TCGCGCGGCG CGACGGCGCA AGCCGTGCGC GACGCCACCG GCCAGGATGC GGTCGACAGC
GAGGATTGCT GGACCACCTT CTTCACGATG GCATCAGACT TCTCGACCGG CCGCGAAGCC
GTGCTGCTGC GCGGCGACCT CGTCCGCAAC GTCGGCGCGA GCTACGCAAT CCCCGGAGCA
CTGCCGCCGG TGTTCGTCGA CGGCCACATG ATGTATGACG GCGGCACGTT CAATAATTTT
CCGGTCGATG TGATGGCGCA GCTCGGTGCC GGCCGCATCA TCGGCGTCGA CCTCTCGGTC
AACCGAGAGC AGGTGTTCGA CATAGACCGC GTGCCGGGAA TGCTCGCCTT GCTGCGCGAC
AAGCTCAGGC CGCGCGCGAA GCGACGCTAC CCTCTGCCGA GCGTGCCGGA GACGCTGCTG
CGGTCGTCCT TCATCACCTC GCTCTCGAAG CAGAAAGCGA TGGGGCAGTT CACCGACCTG
TTGTTCCGGC CGCGCATCGC CGAAGGTCGC CTGCTGGACT GGAGCCGTTT CGAGGAAGTG
GTCGCCGCCG GCTACAGCCA GGCAAGGCAG GTGCTGGCCG GTCTGACCGA CGAGCAGCGG
GAGATGTTCC AATAG
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| Protein sequence | MTPETDPDLQ QRDALLQTVL RGYFASANAG ILRTIQSEAE YVHLASGATL LRQGDLSDDV
YLVVSGRLQA FSETESGVRK ILGEIGRSET VGELALLTGE PRPATVVAVR DTLLVKVTRA
TIERAIMQDP KIEMSMMRTV IRRFRHGERE REAPLVPVNV CILPVTSGLD AADFAQSLRD
AQAAEARPVT VVTADDIAER FGTTPVHPAG RRHDALAGYI DEIEARSRAV YLAADGHDTA
WTRFCLRHAD EILLLADADR DPGRSMVERA CLSPVGSISI ARQTLVLLHK ADTTIPTGTA
RWLDARPAAR HFHIRPQLPS DMRRIARIVS GRGIGLVLSG GGARGFAHIG VIKALEEAGI
PVDMLGGSSI GAVMGMVLAL GRSADEVAAA VRKAFPLHPT GNVTGDYNFI PLVSLIKGAR
SRGATAQAVR DATGQDAVDS EDCWTTFFTM ASDFSTGREA VLLRGDLVRN VGASYAIPGA
LPPVFVDGHM MYDGGTFNNF PVDVMAQLGA GRIIGVDLSV NREQVFDIDR VPGMLALLRD
KLRPRAKRRY PLPSVPETLL RSSFITSLSK QKAMGQFTDL LFRPRIAEGR LLDWSRFEEV
VAAGYSQARQ VLAGLTDEQR EMFQ
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