Gene Nham_1337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1337 
Symbol 
ID4032100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1515725 
End bp1517338 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content65% 
IMG OID637969813 
Producthypothetical protein 
Protein accessionYP_576621 
Protein GI92116892 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGACA TCGTTCTCTC GACATCCGTT CGCCAGAATC TGCTCTCGTT GCAGTCAACA 
GCCGACCTGC TGGCGACGAC GCAGAATCGT CTCGCCACCG GCAAGAAGGT GAACACGGCC
CTCGACAACC CGACCAACTA TTTCACCGCC GCCGCGCTCG ACAACCGCGC CCACGACATC
AACAGTCTGC TCGACGGCAT CGGCAACGGC GTACAGGTGC TGCAGGCGGC CAACACCGGC
CTGACCTCGC TGCAGAAGCT GGTCGACACC GCGAAGTCGG TCGCCAATCA GGTTCTGCAA
TCCCAGGCCG GCTATTCGCA GAAGTCGTCG GTAGCGAGCC TGCCCGTGAC GGGCGCGACC
GCGCTCGATC TCAGAGGCAC GACACCGTTT ACGAACGCAG CCGCGACGCC CGGCACCGCC
CTGAAGACCG GCACCTCCAA CGCTGCCGCA ACCGGCACCA CCTTTATCAA TACGCTGACC
AACGGCGCTA CCGCGACGCT GACCGGCCCC GTCGCCGGCG ACAGCTTTTC CGTCAACGGC
AAGACCGTCA CGTTCTCCGC GTCCGGCGCG GCCACCACCG ACGCCTCTGG AAACGTCACG
ATCGGCATCG ACCAGACGCT GAGCGCGCTG ACCGGCGTGA TCGATACGCT GGACGGCAAC
ACCGTGCCCG CGACGGCATC GGCCGTGAGC GGAACCGGTC AGATCGCGCT CAACACCGGT
ATCGCTCATG ACCTGACGCT GGCGGACTCC ACGCCGGGCG TGCTCGCAAA GCTCGGCCTG
ACCACGGGAA CGACAGCGCG CGGCGGCGGC GCGGGAAACC TCGACGGCAA GACGCTGACG
ATCGGGGCAA CGGGCGGTGG CGTCGCGACC AGCATCACTT TCGGCGACGG CACCAACGGC
ACCGTCAAAA GCCTCAACGG CCTGAACGCG CAGCTCGCCT CCAACAATCT TCAGGCCTCG
ATCGACGCGA CGGGCGCGAT CACGATCTCG ACCTCCAACG AGGCCGCCGC CGCGACCATC
GGCACGATCG GCGGGACCGC GGCCGGCGCT GGCTATGCGT TCAACGGCCT GGTCGCCGGC
GCGCCTGTTG AAGACGCTTC GGTTCAGGCG TCCCGCGCTG GCCTCGTCAA TCAGTACAAC
AACATCATTC AGCAGATCAA CACGACGACG GCGGACGCAT CGTTCAACGG CATCAATCTG
CTCAATGGCG ACACGCTGAA GCTCATCTTC AACGAGACCG GAAAGTCCGT GCTCACCATC
AACGGCACCA GTACCAATGC AGCCGGCCTC GGACTGTCGA CCCTGACGGC GGGCACCGAC
TTCCTGGACA ACGGCTCTGC CAACAGCGTG ATCGCGAACC TCGACAAGGC GTCGAGCACG
CTGCGCGCGC AGGCTTCGAC GCTCGGCGCA AACCTGTCGA TCGTGCAGAT CCGTCAGGAC
TTCTCGAAGA ACCTGATCAA CGTGTTGCAG ACCGGCTCAA GCAACCTGAC GCTCGCTGAC
ACCAACGAGG AAGCGGCGAA CAGCCAGGCG CTGGCCACCC GCCAGTCGAT CGCGGTGTCG
GCGCTGGCGC TGGCCAACCA GTCGCAGCAG AGCGTGCTGC AACTGCTGCG CTGA
 
Protein sequence
MSDIVLSTSV RQNLLSLQST ADLLATTQNR LATGKKVNTA LDNPTNYFTA AALDNRAHDI 
NSLLDGIGNG VQVLQAANTG LTSLQKLVDT AKSVANQVLQ SQAGYSQKSS VASLPVTGAT
ALDLRGTTPF TNAAATPGTA LKTGTSNAAA TGTTFINTLT NGATATLTGP VAGDSFSVNG
KTVTFSASGA ATTDASGNVT IGIDQTLSAL TGVIDTLDGN TVPATASAVS GTGQIALNTG
IAHDLTLADS TPGVLAKLGL TTGTTARGGG AGNLDGKTLT IGATGGGVAT SITFGDGTNG
TVKSLNGLNA QLASNNLQAS IDATGAITIS TSNEAAAATI GTIGGTAAGA GYAFNGLVAG
APVEDASVQA SRAGLVNQYN NIIQQINTTT ADASFNGINL LNGDTLKLIF NETGKSVLTI
NGTSTNAAGL GLSTLTAGTD FLDNGSANSV IANLDKASST LRAQASTLGA NLSIVQIRQD
FSKNLINVLQ TGSSNLTLAD TNEEAANSQA LATRQSIAVS ALALANQSQQ SVLQLLR