| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1334 |
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| Symbol | |
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| ID | 4032097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1511429 |
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| End bp | 1512922 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637969810 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_576618 |
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| Protein GI | 92116889 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTTCG CACCGCGCGA GCCGCGGGCT GACGCCGACG AGACACTCGA TCCGGACGAC
TGGGACGCAC TGCGCGCGCA GGGGCACCGG ATGCTCGACG ATATGGTCGA TTATATCGCC
GGCATTCGCA CGCGCCCGGT GTGGCAGCCA ATTCCAGCGG AAACGCGTGC ACGCTTCCGC
GCCGGGCTGC CGCGGGCGAG CGCCGATCTC GACGGGATCT ATCGGGAGTT TGCCGACCAC
ATCGCGCCTT ACACCGCCGG CAACGTTCAT CCCGGCTTCA TGGGGTGGGT CAACGGGGGC
GGCACCGCCG TCGGAATGCT GGCCGAGATG CTGGCGGCCG GGCTGAACGC CAATCTCGGC
GGCCGCGATC ACGTTCCGAT CGAGGTCGAG CGCCAGATCG CTCTGTGGGT GCGGCAGATG
TTCGGCTTTC CCGATACCGC GAGCGGCATC TTCGTCACGG GGACATCGAT GGCGAACCTG
ATGGGGGTGC TGGTGGCGCG CGCGGCGCGG CTCGGCCCGT CGGTGCGCGA GCGGGGTCTG
TCGGATCGCG GCGCCGGTCT CACCGCCTAT ACGTCGGCGG CGACGCACGG TTGCATCGCG
CAGGCCATGG ACCTCGCCGG CTTCGGCACC GACGCGCTGC GGCGGATTCC GGTCGATCGC
TGCCATCGCA TCGGTGTCGA TGCGTTGCGT GCGCAGGTCG CAGTCGATCG CGCTGCCGGT
CTTGAACCGT TTCTGGTGAT CGGCTCGGCC GGGACCGTCG ACATCGGGGC GATCGACGAT
CTGGCGGCGT TGCATGCGCT GTGCCGTGAT GAGAACCTGT GGCTGCACAT CGACGGTGCG
TACGGCGCGC TCGGTATCCT GTCGCCGGAG ATCGCACCGC GCCTTGCCGG CATCGAGAGC
GCCGACTCCA TTGCTTTCGA TTTCCACAAA TGGGGACAGG TGCCCTATGA TGCGGGTTTC
CTTCTCGTCC GCGACGGCGA GCAGCACCGG CGGACGTTTG CGGCGCCGGC GGCGTATCTG
CGTCGGGAAA CGCGCGGGCT CGCGGCGGGC TCGCCGTGGC CGTGCGACTA CGGGCCGGAT
ATGTCGCGCG GATTCCGCGC GCTGAAGACG TGGTTCACGT TGAAAGCCTA CGGCACCGAC
AAGCTCGGCG CGATGATCGC CCGGACCTGC GCGCTCGCGC GCTGCCTCGA AGCGAAGGTC
GCCGCCGAGC CGAAGCTCGA ACTGCTGGCG CCGGTGCAAC TCAACATCGT GTGCTTCCGC
TATCGGTCCG ACGATACCGA CAGGGTCAAT GCCGGGATCG TCGCATCGCT GCACGAGTCG
GGTATAGCGG CGCCGTCCAC GACCACGCTC GACGGCCGGC TGGCGATCCG CGCGGCGATC
GTCAATCATC GCACCGGGGT GCGCGACATC GAAGCGCTGG TGTCGGCGGT GCTGGAATTC
GGCGCGCGTG AATCCGAAGT TCGCCAATTT GAAGCCCGCG AAGCCGGACG CTGA
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| Protein sequence | MTFAPREPRA DADETLDPDD WDALRAQGHR MLDDMVDYIA GIRTRPVWQP IPAETRARFR
AGLPRASADL DGIYREFADH IAPYTAGNVH PGFMGWVNGG GTAVGMLAEM LAAGLNANLG
GRDHVPIEVE RQIALWVRQM FGFPDTASGI FVTGTSMANL MGVLVARAAR LGPSVRERGL
SDRGAGLTAY TSAATHGCIA QAMDLAGFGT DALRRIPVDR CHRIGVDALR AQVAVDRAAG
LEPFLVIGSA GTVDIGAIDD LAALHALCRD ENLWLHIDGA YGALGILSPE IAPRLAGIES
ADSIAFDFHK WGQVPYDAGF LLVRDGEQHR RTFAAPAAYL RRETRGLAAG SPWPCDYGPD
MSRGFRALKT WFTLKAYGTD KLGAMIARTC ALARCLEAKV AAEPKLELLA PVQLNIVCFR
YRSDDTDRVN AGIVASLHES GIAAPSTTTL DGRLAIRAAI VNHRTGVRDI EALVSAVLEF
GARESEVRQF EAREAGR
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