Gene Nham_1332 details

Gene Information

• Locus tag: Nham_1332
• ID: 4032095
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 1507399
• End bp: 1509258
• Gene Length: 1860 bp
• Protein Length: 619 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637969808
• Product: flagellar hook-associated protein
• Protein accession: YP_576616
• Protein GI: 92116887
• COG category: [N] Cell motility
• COG ID: [COG1256] Flagellar hook-associated protein
• TIGRFAM ID: [TIGR02492] flagellar hook-associated protein FlgK

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.143121
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTTGA GTTCGGCCCT CTCTATCGCG ATGTCCGGCC TGCGCGCCAA CCAGGCGGCG 
CTGTCGATCG TCTCCGGCAA TGTCGCTAAC GCGAACACGC CGGGCTACGT CGCGCAGACG 
CTGGTGCAGG ACCAGATCGT GACCGGCAGC ACCGGCTCCG GCGTCCGCGT CATCGGCGTT 
AACCGTACGC TCGATACCTA TGTGCAGTCG CAGTTGCGGA CCGAAAACGC CGGCGGCGCT 
TATGCCGATC AGATCGCCAA CGTGCTCGGC CAGTTGCAGA ACGTCTATGG CACGCCGGGC 
AACGACGGCA CGCTGGAAAA CGCGCTCAAC AATTTCACCT CGGCGTTGCA GGCGCTGTCG 
GCAAGCTCGG GCAACACGGC GGCGCAGTCC TCGGTGCTGA ACGCCGCGCA GGCGCTGGCG 
CAACAGCTCA ACGCCACCAC CAGCGGCATC CAGACGTTGC GCTCCAACGC CGAACAGGAT 
CTCTCGGTAT CGGTCTCGCA GGCCAACGCG GCGATGGCCC AGATCGCCCA GATCAATCAG 
AAGCTGCAGG GCATGAGCGC CCAGGACCCG GCCGCCGCGA CGTTGATGGA TCAGCGCGAC 
AGTGCGGTCG ACCAACTCTC AAGGCTGATG GATGTCCGCG CGGTCACCGA CGGCGCCAAT 
CAGACGTCGG TGTTCACCAC GTCGGGCATT CAGCTCGTCG GTGGGGTGCA GGCGTCCACG 
CTGTCGTTCA ACGCGCAGTC CTCGCTCACC GCGAACTCGC AGTGGAACGC CGATCCGAGC 
AAATCGAGCG TCGGCACCAT CATCTGCCAG CTTCCGAATG GCGCCAAAAT CGACATGATC 
GCGACGCAGT CGATCAACTC CGGGCAGATC GCAGCCGACG TCCAGTTGCG CGACAAGACG 
CTGGTGCAGG CGCAGAACCA GGTCGACCAG ATGGCGGCGA CGCTGGCCAG CGCGCTGTCC 
GATGTCACGA CCTCGGGCAC GAAGACAGCC GGGCCACCGG TGAGCTATGC GACCGATCTG 
ACCAACGTGT TGCCGGGTAA TTCGTTCAAT GTCACCTATA CCGATTCGAG CAACGTCCAG 
CACAACGTCA CCGTCGTGCG CGTGGATGAT CCAACCGCGC GGCCGATTCC GAACACGGCG 
TCGAACCCGA ATGACAAGGT CATCGGCGTC GATTTTTCCG GCGACGCGGC GTCGGTCGCA 
GCACAGCTTA GCGCCGCGCT CGGTTCGTCC AACCTGAATT TCTCCGGCGT TGGCATGTCG 
CTTCAGGTGA CGAGTACCGC AGCGTCCACC GTCAACGCGG CATCGACCAC GACGACGGTG 
CAGTCGCTGG CCTCGGGCAA TCCGCAACTG CCGTTTTTCA CGGACCGCGC CTCGCTCTAT 
ACCGGCGCGA TCACAGGCAC CGCGTCGCAA ATCACGGGGC TGGCAGGGCG CATCCAGGTC 
AATGCGAAGC TGCTCGCCGA TCCCTCGAAG CTCACGATCT ACAATACCTC GCCGGTGACG 
CCCGCGGGCG ACACCACGCG CTCCGACTTC ATTTTCGACC AGTTGACGTC GGCGACTTAC 
ACCTATTCGC CGAACACCGG CCTCGGCGCG GCGGCCGCGC CGTTCAAGGG CACGCTGCCG 
TCGTTCCTGC AACAGTTCGT CAGCGTGCAG AGCAGCGCGG CGACCACGGC GAAGCAGGTG 
GCGCAGGGCC AGGACGTCGT CGTCAACACG TTGCAGGAGA AGTTCAATGC CAAGGCGGGC 
GTGAATATCG ACACCGAAAT GACCAACCTG ATCGCGCTGC AAAATTCCTA CGCGGCGAAC 
GCGCATGTGA TGTCGGTGGT GCAGAGCATG ATGCAGACGC TGCTGCAGGC GCAAATATAA 

 

Protein sequence

MSLSSALSIA MSGLRANQAA LSIVSGNVAN ANTPGYVAQT LVQDQIVTGS TGSGVRVIGV 
NRTLDTYVQS QLRTENAGGA YADQIANVLG QLQNVYGTPG NDGTLENALN NFTSALQALS 
ASSGNTAAQS SVLNAAQALA QQLNATTSGI QTLRSNAEQD LSVSVSQANA AMAQIAQINQ 
KLQGMSAQDP AAATLMDQRD SAVDQLSRLM DVRAVTDGAN QTSVFTTSGI QLVGGVQAST 
LSFNAQSSLT ANSQWNADPS KSSVGTIICQ LPNGAKIDMI ATQSINSGQI AADVQLRDKT 
LVQAQNQVDQ MAATLASALS DVTTSGTKTA GPPVSYATDL TNVLPGNSFN VTYTDSSNVQ 
HNVTVVRVDD PTARPIPNTA SNPNDKVIGV DFSGDAASVA AQLSAALGSS NLNFSGVGMS 
LQVTSTAAST VNAASTTTTV QSLASGNPQL PFFTDRASLY TGAITGTASQ ITGLAGRIQV 
NAKLLADPSK LTIYNTSPVT PAGDTTRSDF IFDQLTSATY TYSPNTGLGA AAAPFKGTLP 
SFLQQFVSVQ SSAATTAKQV AQGQDVVVNT LQEKFNAKAG VNIDTEMTNL IALQNSYAAN 
AHVMSVVQSM MQTLLQAQI