Gene Nham_1306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1306 
Symbol 
ID4032108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1473916 
End bp1475442 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content65% 
IMG OID637969783 
Productintegral membrane protein MviN 
Protein accessionYP_576591 
Protein GI92116862 
COG category[R] General function prediction only 
COG ID[COG0728] Uncharacterized membrane protein, putative virulence factor 
TIGRFAM ID[TIGR01695] integral membrane protein MviN 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGGAC GCATTTTCAC CGTCGGCGGA TATACGCTGC TCTCGCGACT GACGGGGTTT 
GCGCGCGACA TCATGCTTGC GGCGATCCTC GGCGCCGGAC CGGTCGCAGA TGCCTTCTTC
GTAGCGCTGC GGCTGCCGAA TCATTTCCGG GCGATCTTCG CCGAAGGAGC CTTCAACGCG
GCGTTCGTGC CGGCTTACGC GCATGTCGCT GGCGGCGGCC CGGCTTCCGC AAAGCTGTTC
GCCAACCGCA TTTTCACGCT GCTGTTGCTG TCGCAGGTGA TCCTGCTGGC GATAGCATGG
CTGTTCATGC CGCAGGTCAT CGCGCTGCTG GCACCCGGAT TCGTCGATGA CCCGGTGCGC
GGCGAACTCG CCATTTCGCT AACGAGGATT ACCTTTCCTT ATCTTCTCTT GATCACGCTG
GTGACGCTGT ACGGCGGGAT GCTCAACGTC ATGCACCGTT TCGCCAGCGC GGCTGCGGCG
CCGATCTTCC TCAACCTGTC GATGATCGTG ACGCTGGCGC TTGCGGCATT CTTCCCCAAT
GCCGGGTATG CGGCGGCGTG GGGCGTGCTG ATCTCGGGCT TCCTGCAATA TTTTCTATTG
GCGACCGACG CCGCGCGGCA GGGTCTGCTC CCGCGCCTGA CGCGACCAAC GCTCGACGCC
GACGTGCGCG GCTTCTTTCG CGCGCTGGGG CCGGCCACGA TCGGTTCGAT GGGCACGCAG
ATCGCGATGT TCGCCGACAC CATCATCGCC ACCTTCCTCG CCGCCGGCGC GTTGTCGGCG
CTGTATTACG CCGACCGGCT CAATCAACTG CCGATCGGCG TGATCGGCAT CGCCATCGGC
ACCGTGCTGC TGCCCGAGAT GTCGCGGCGG ATCACCGCCG GCGATCACCA GGGCGCGATG
GCATCGCAGC GCCGGGCGTT CGATTTCACG TTGCTGTTTT CGGTGCCGTT CGTGGCCGCG
TTCCTGACTG TCCCCGATGT GATCATGCGG GCGATGTTCG CACGCGGCGC TTTTTCGAAA
GCGGACGCGG CAGCAGCCGG CGCCACGCTT GCCGCCTATG CGGTGGGGCT CATTCCCTTT
GTCCTGATCC GCAGCGCGGT TGCTGCCTTT TACGCACGCA AGAACACCGC GACGCCGGTG
AAGGCCGCGT TGACCGGGGT CGCGGTCAAC GTCGCGCTGA AAATCGCGCT TGTGGGATCG
CTCGCGCAGA TCGGCCTCGC GCTTGCCACG GCGGTCGGCG CCTGGATCAA TCTGCTGCTC
GTGATCGGAT TTGCGGTGCG GGCGGGATAC TTCGAGGTCG GCCGTCCGTT GCTGGTCTCG
CTCGGCAAAT TCCTCATCGC GGGTGCGGTG CTCGCGGCGG CACTGTGGTT CACCGCGCGC
TTCGCCTCGG GGCAGTTCGC GCACTGGAGC ACGATGCGCG ATGAAGCGGC TCTTGGGGTG
CTGATGATCG TCGGCGCGGC CGTCTATGCG GGCACGATTT TACTGCTGTT CGGGCCGCGC
TGGCTGAAGG CGCTGGTGCG AGCCTAG
 
Protein sequence
MLGRIFTVGG YTLLSRLTGF ARDIMLAAIL GAGPVADAFF VALRLPNHFR AIFAEGAFNA 
AFVPAYAHVA GGGPASAKLF ANRIFTLLLL SQVILLAIAW LFMPQVIALL APGFVDDPVR
GELAISLTRI TFPYLLLITL VTLYGGMLNV MHRFASAAAA PIFLNLSMIV TLALAAFFPN
AGYAAAWGVL ISGFLQYFLL ATDAARQGLL PRLTRPTLDA DVRGFFRALG PATIGSMGTQ
IAMFADTIIA TFLAAGALSA LYYADRLNQL PIGVIGIAIG TVLLPEMSRR ITAGDHQGAM
ASQRRAFDFT LLFSVPFVAA FLTVPDVIMR AMFARGAFSK ADAAAAGATL AAYAVGLIPF
VLIRSAVAAF YARKNTATPV KAALTGVAVN VALKIALVGS LAQIGLALAT AVGAWINLLL
VIGFAVRAGY FEVGRPLLVS LGKFLIAGAV LAAALWFTAR FASGQFAHWS TMRDEAALGV
LMIVGAAVYA GTILLLFGPR WLKALVRA