Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1280 |
Symbol | murC |
ID | 4032179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 1440170 |
End bp | 1441573 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637969757 |
Product | UDP-N-acetylmuramate--L-alanine ligase |
Protein accession | YP_576565 |
Protein GI | 92116836 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.797916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACTGC CGCGCGAAAT CGGCCCCATC CACTTCGTCG GTATCGGCGG CATCGGCATG AGCGGCATTG CAGAGGTGTT ATGCAACCTC GGCTACACCG TGCAGGGCTC GGACGCCTCC GAAGGCGCCA ATGTGGTGCG CCTGCGCGAC AAAGGCATCA AGGTCACGGT CGGCCACCGG GCCGAGAACG TGAGCGGCGC GGACGTGCTT GTCGTCTCTA CCGCGATCAG GCGCGACAAC CCCGAACTGA TGGCGGCGCG CGCGCAGCGC ATTCCGGTGG TGCGCCGTGC CGAGATGCTC GCGGAACTGA TGCGGCTGAA AAGCTGCGTC GCTATCGCCG GCACCCACGG CAAGACCACG ACCACCTCCA TGGTCGCGGC GCTGCTCGAC GCTGGCGATT TCGATCCCAC CGTCATCAAC GGCGGCATCA TCAACGCCTA TGGCACCAAC GCGCGGTTAG GGGCCGGCGA GTGGATGGTG GTGGAGGCCG ACGAGAGCGA CGGCACATTC CTCAAGCTGC CGACCGATGT CGCCATCGTC ACCAATGTCG ACCCCGAGCA TCTCGATCAC TTCAAGACCT TCGACGCCGT GCAGGACGCA TTCCGCTCCT TTGTGGAGAA CGTACCGTTC TACGGCTTTG CGGTGATGTG TATCGATCAT CCGGTGGTGC AGTCCATGGT CGGCCGCATC GAGGATCGCC GCATCGTCAC CTATGGCGAG AATCCGCAGG CCGATGCGCG GCTGGTCGAT CTTGCGCCGA ACGGCGGCGG CTCGCATTTC AAGGTGGTGT TCCGCAATCG CAAGACCGAT GCCGCGCACG AGGTTTCCGA TCTGGTGCTG CCGATGCCGG GCCGTCACAA CGCGCTCAAC GCCACGGCGG CGATCGCGGT AGCGCACGAA CTCGGCATTC CCGACGCCAC CATCCGCAAG GCGATCGCGG CGTTCGGCGG CGTCAAGCGC CGCTTTACCA AGACCGGCGA GTGGAACGGC GTCACCATCA TCGACGACTA CGGCCATCAT CCGGTCGAGA TTGCCGCGGT GTTGAAAGCG GCGCGCGAGT CGACCGGCGG CAAGGTCGTC GCCGTGGTGC AGCCGCATCG CTACACCCGC CTGCAATCGC TGTTCGAGGA ATTCTGCACC TGCTTCAACG ATGCGGATAC CGTTGTCGTC GCCGAAGTCT ATCCGGCGGG CGAGGCGCCG ATCGCAGGTA TCGACCGCGA CCACTTCGTG CTCGGCCTGC GCGCCCACGG CCACCGCGAG GTGGTGCCGC TGCAGGAGCC GGCGGCGCTG GCGGGCGTCA TTGCAGGTCT CGCGAAGCCC GGCGATTATG TCGTGTGTCT CGGCGCCGGC AACATCACCC AATGGGCCTA CGCGCTGCCG GGCGAGTTGA AGGCGCTGGG ATGA
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Protein sequence | MRLPREIGPI HFVGIGGIGM SGIAEVLCNL GYTVQGSDAS EGANVVRLRD KGIKVTVGHR AENVSGADVL VVSTAIRRDN PELMAARAQR IPVVRRAEML AELMRLKSCV AIAGTHGKTT TTSMVAALLD AGDFDPTVIN GGIINAYGTN ARLGAGEWMV VEADESDGTF LKLPTDVAIV TNVDPEHLDH FKTFDAVQDA FRSFVENVPF YGFAVMCIDH PVVQSMVGRI EDRRIVTYGE NPQADARLVD LAPNGGGSHF KVVFRNRKTD AAHEVSDLVL PMPGRHNALN ATAAIAVAHE LGIPDATIRK AIAAFGGVKR RFTKTGEWNG VTIIDDYGHH PVEIAAVLKA ARESTGGKVV AVVQPHRYTR LQSLFEEFCT CFNDADTVVV AEVYPAGEAP IAGIDRDHFV LGLRAHGHRE VVPLQEPAAL AGVIAGLAKP GDYVVCLGAG NITQWAYALP GELKALG
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