Gene Nham_1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1280 
SymbolmurC 
ID4032179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1440170 
End bp1441573 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content66% 
IMG OID637969757 
ProductUDP-N-acetylmuramate--L-alanine ligase 
Protein accessionYP_576565 
Protein GI92116836 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01082] UDP-N-acetylmuramate--alanine ligase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.797916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACTGC CGCGCGAAAT CGGCCCCATC CACTTCGTCG GTATCGGCGG CATCGGCATG 
AGCGGCATTG CAGAGGTGTT ATGCAACCTC GGCTACACCG TGCAGGGCTC GGACGCCTCC
GAAGGCGCCA ATGTGGTGCG CCTGCGCGAC AAAGGCATCA AGGTCACGGT CGGCCACCGG
GCCGAGAACG TGAGCGGCGC GGACGTGCTT GTCGTCTCTA CCGCGATCAG GCGCGACAAC
CCCGAACTGA TGGCGGCGCG CGCGCAGCGC ATTCCGGTGG TGCGCCGTGC CGAGATGCTC
GCGGAACTGA TGCGGCTGAA AAGCTGCGTC GCTATCGCCG GCACCCACGG CAAGACCACG
ACCACCTCCA TGGTCGCGGC GCTGCTCGAC GCTGGCGATT TCGATCCCAC CGTCATCAAC
GGCGGCATCA TCAACGCCTA TGGCACCAAC GCGCGGTTAG GGGCCGGCGA GTGGATGGTG
GTGGAGGCCG ACGAGAGCGA CGGCACATTC CTCAAGCTGC CGACCGATGT CGCCATCGTC
ACCAATGTCG ACCCCGAGCA TCTCGATCAC TTCAAGACCT TCGACGCCGT GCAGGACGCA
TTCCGCTCCT TTGTGGAGAA CGTACCGTTC TACGGCTTTG CGGTGATGTG TATCGATCAT
CCGGTGGTGC AGTCCATGGT CGGCCGCATC GAGGATCGCC GCATCGTCAC CTATGGCGAG
AATCCGCAGG CCGATGCGCG GCTGGTCGAT CTTGCGCCGA ACGGCGGCGG CTCGCATTTC
AAGGTGGTGT TCCGCAATCG CAAGACCGAT GCCGCGCACG AGGTTTCCGA TCTGGTGCTG
CCGATGCCGG GCCGTCACAA CGCGCTCAAC GCCACGGCGG CGATCGCGGT AGCGCACGAA
CTCGGCATTC CCGACGCCAC CATCCGCAAG GCGATCGCGG CGTTCGGCGG CGTCAAGCGC
CGCTTTACCA AGACCGGCGA GTGGAACGGC GTCACCATCA TCGACGACTA CGGCCATCAT
CCGGTCGAGA TTGCCGCGGT GTTGAAAGCG GCGCGCGAGT CGACCGGCGG CAAGGTCGTC
GCCGTGGTGC AGCCGCATCG CTACACCCGC CTGCAATCGC TGTTCGAGGA ATTCTGCACC
TGCTTCAACG ATGCGGATAC CGTTGTCGTC GCCGAAGTCT ATCCGGCGGG CGAGGCGCCG
ATCGCAGGTA TCGACCGCGA CCACTTCGTG CTCGGCCTGC GCGCCCACGG CCACCGCGAG
GTGGTGCCGC TGCAGGAGCC GGCGGCGCTG GCGGGCGTCA TTGCAGGTCT CGCGAAGCCC
GGCGATTATG TCGTGTGTCT CGGCGCCGGC AACATCACCC AATGGGCCTA CGCGCTGCCG
GGCGAGTTGA AGGCGCTGGG ATGA
 
Protein sequence
MRLPREIGPI HFVGIGGIGM SGIAEVLCNL GYTVQGSDAS EGANVVRLRD KGIKVTVGHR 
AENVSGADVL VVSTAIRRDN PELMAARAQR IPVVRRAEML AELMRLKSCV AIAGTHGKTT
TTSMVAALLD AGDFDPTVIN GGIINAYGTN ARLGAGEWMV VEADESDGTF LKLPTDVAIV
TNVDPEHLDH FKTFDAVQDA FRSFVENVPF YGFAVMCIDH PVVQSMVGRI EDRRIVTYGE
NPQADARLVD LAPNGGGSHF KVVFRNRKTD AAHEVSDLVL PMPGRHNALN ATAAIAVAHE
LGIPDATIRK AIAAFGGVKR RFTKTGEWNG VTIIDDYGHH PVEIAAVLKA ARESTGGKVV
AVVQPHRYTR LQSLFEEFCT CFNDADTVVV AEVYPAGEAP IAGIDRDHFV LGLRAHGHRE
VVPLQEPAAL AGVIAGLAKP GDYVVCLGAG NITQWAYALP GELKALG