| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1223 |
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| Symbol | |
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| ID | 4032275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 1379273 |
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| End bp | 1381600 |
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| Gene Length | 2328 bp |
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| Protein Length | 775 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637969702 |
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| Product | peptidoglycan binding domain-containing protein |
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| Protein accession | YP_576511 |
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| Protein GI | 92116782 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.213789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAGACT ATTCGACTAA CCGGACCGGA TTCGACCGGA TCCTGACGGT CCTTGCCGCG
ACGTTTCTAA CGGTGTCCAC CTCGGCAGCA TTTGCCCAGA CCGACATCGC GAAGAAGAGC
GCCAGCGAAC TCGCAATCGA CGCCGCAATT CCGATGCCGG AGCCCGCGAA CGTTCCGCCG
CCCACCGCAG CCGATTTCAA GATGGACAAT GTGCCGCCCG CGCCCCCGAT CGTCGGCGCG
TCGAAACCGG CTGACCACAA GACCTCCGAT ACGACAGCGA CCGATACGAA ACCGGCTGAT
ACCAAAGCGG CCGGCACTGC GGATTCCGAG GCGCCTTCGA ACGTGACGGC TGCCTCCGAC
ACAAAGGCCT CCGGCGCAAC GACGACTTCG TCCGACACCA AAGCTTCCGA CAGCAAGGCG
GCTGAGACAA AACCAGCGGA TGCCAAACCG GCCGATGTCG CGGCCACTCC TGCGGACGGC
ATCAAGACGA ACGAAGCGAC CAAGGACGAG CCGAAGAAGG ACGCGACCGC GACGATCACG
CCCGCCGCTA CGCCTCCAGC GGCGACCGCC ACTGCGCCGG CAGCCAAGCA GCCGGGCGAA
CCCGTGAAGG CCGCGAGCAA TGTCCCGCCG GCGGATCAGC CGGTGGCCGA AAAGCTGCAC
GAATTGCTCG ATACCAAGGC CACAAAACTC TTCGACCGCA AGGCCGAGCG AACAGCAATC
GAGACATTCT ACGCGGCGCG GAGCTATGCG CCGCTATGGA CGGAAGGCGG CACACTGAAT
GCGCAGGCCA AGGGCGTGAT CGCGCGTCTC AAGGACGCCG CGGCCGACGG CCTCGATCCC
GCCGACTATC CGGTGCCCGA CTTTGCCGCA GCGTCATCGC CGGACCAGTT CGCGGACGCC
GACCTCAAGC TGACCGCGAG CATGATGAAC TACGCCCGCC AGGCCCAGAG CGGCCGGATG
CACTGGTCGC AGGTCGGCGC GGATATCCAG TATCCCGAGC ATCCCATCGA TCCCGAGCAG
GTTTTGACGA ACGTCACCAC CGCGAAGGAT GCCTCCGCGG CGCTCGACAG CTACAACCCG
CCGCAAAAAC TCTATCGCGA GCTGAAGCAG AAGCTGGCCG AACTGCGCAA GACGTCGGAA
GGCCCCGTGG TCGAAATTGC CGAAGGTCCG AGTCTGGTGT TCCGCAAGAA TGCCGTGATG
GAGGATCCGC GCGTGCCGCA GATTCGCGCC AAGCTCGGCG TCACTCAAAA TCCCGACGAT
GCCCACTTCG ACGCCGATGT CGCTGCCGCC GTGCGGGAAT TCCAGACTCG CAATCACCTC
CAGCCCGACG GCATCGCGGG CAACAACACG ATCCGCGCCC TGAACGGTCC GAGGAAGGGT
CACCAGATCG ACACCATTAT CGTCAACATG GAGCGCTGGC GCTGGCTGCC GCGCGAACTC
GGCGCTCCGT CGCTCGGCAA CGCCTACGCC ATCCTGAATA TTCCTGACTA CACGCTCAAG
GTGATGCAGC ATGGCGCGCA GCTCTGGAGC ACCCGCGTCG TCGTCGGCAA GCCGGGAATC
CATGCCACGC CGCTGCTGAC GGAAACGATG AAGTACATCA CCGTCAATCC GACCTGGAAC
GTGCCGCCGT CGATCATCTA CAAGGAATAT CTGCCCGCCT TGCAGCAGGA TCCGACCGTG
CTGGAGCGCA TGGGTCTCAA GCTGGAGCGC GACCGCAACG GCGGCATCCA CATTTCGCAA
CCGCCCGGCG ACCGCAATGC GCTGGGCCGC ATCCGCTTCA ATTTTCCGAA CAAGTTCCTA
GTGTATCAGC ACGATACGCC GGACAAATAC CTGTTTGCCA AGGAGAAGCG CGCTTTCAGC
CACGGCTGCA TGCGGGTTCA GAACCCCGAT CAGTATGCGG CGACGCTGCT CAATATTGCC
CTGCCGCAGG AGCACTACAC TCCGGAGAAA ATCCGAGGCA TGTATGGCCG GAAGGAATTC
GACATCAAGT TCCCGACTCC GATTCCGGTC AACATCACCT ATCAGACCGC GTTCGTGGAT
CATGCCGGCA AATTGCAGAT CCGCCCCGAC GTCTACGGCA GCGATGCCAA GATGCTGGCG
CTGCTTCGCA ACCCCAAGGG CCGCGATCTC GAAGCGGTGA TCGCCCATGC CCAGCCGAAC
TATTCCCGCC CCAAAGGGGA CATCCCGCAA CAGGGCGTCG CCTTCAATGA AAACCGCGGG
TTTGGCGGCG GTTTCGACAA CGGCGGCCCG TCGTTCTTCG AGCGGCTGTT TGGATTCCAG
ACCCCGCCCC CCCAGGTCGA GGACCGCCGC CGCAGGATTT GGCGCTAG
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| Protein sequence | MRDYSTNRTG FDRILTVLAA TFLTVSTSAA FAQTDIAKKS ASELAIDAAI PMPEPANVPP
PTAADFKMDN VPPAPPIVGA SKPADHKTSD TTATDTKPAD TKAAGTADSE APSNVTAASD
TKASGATTTS SDTKASDSKA AETKPADAKP ADVAATPADG IKTNEATKDE PKKDATATIT
PAATPPAATA TAPAAKQPGE PVKAASNVPP ADQPVAEKLH ELLDTKATKL FDRKAERTAI
ETFYAARSYA PLWTEGGTLN AQAKGVIARL KDAAADGLDP ADYPVPDFAA ASSPDQFADA
DLKLTASMMN YARQAQSGRM HWSQVGADIQ YPEHPIDPEQ VLTNVTTAKD ASAALDSYNP
PQKLYRELKQ KLAELRKTSE GPVVEIAEGP SLVFRKNAVM EDPRVPQIRA KLGVTQNPDD
AHFDADVAAA VREFQTRNHL QPDGIAGNNT IRALNGPRKG HQIDTIIVNM ERWRWLPREL
GAPSLGNAYA ILNIPDYTLK VMQHGAQLWS TRVVVGKPGI HATPLLTETM KYITVNPTWN
VPPSIIYKEY LPALQQDPTV LERMGLKLER DRNGGIHISQ PPGDRNALGR IRFNFPNKFL
VYQHDTPDKY LFAKEKRAFS HGCMRVQNPD QYAATLLNIA LPQEHYTPEK IRGMYGRKEF
DIKFPTPIPV NITYQTAFVD HAGKLQIRPD VYGSDAKMLA LLRNPKGRDL EAVIAHAQPN
YSRPKGDIPQ QGVAFNENRG FGGGFDNGGP SFFERLFGFQ TPPPQVEDRR RRIWR
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