Gene Nham_1222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1222 
Symbol 
ID4032274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1377421 
End bp1379001 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content66% 
IMG OID637969701 
Producthypothetical protein 
Protein accessionYP_576510 
Protein GI92116781 
COG category[S] Function unknown 
COG ID[COG3108] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTGCTG GTTTTGCACG CGTTTTGAAA TCGTTGTCGA TTCCACGCGC CGGTTATCAC 
ATCGGCCTGT CGTCGCTTCT GCTGCTGGCG GGCGCGGGAT CGGTGCATGA TGCCGCCGCG
CTCAACGAAA CGCGCACCCT GTCGTTTCAT CACACCCATT CCAGCGAAGA CCTGACCGTC
ACCTTCAAGC GCAACGGCCG CTACGACGAA GCCGCGCTGA AACAGCTCAA TCACTTTCTC
CGCGACTGGC GCAGCCAGGA GCAGACCACC ATGGATCGTC ACCTCTTCGA CATTCTCTGG
GAGGTCTACC GCGATGTCGA CGCCCGGCAG CCGATCAACA TCGTCTCCGC CTACCGCTCC
CCCGCCACCA ATGCCATGCT TCGCCGCCGC TCCAAACACA CCGGCGTCGC GCGCTTCAGC
CAGCACATGC TCGGCCACGC AATGGACTTC TTCATTCCCG GCGTGCCGCT CGAAAAAATC
CGTTTCGCCG GACTTCGCCT GCAACGCGGC GGCGTCGGCT TCTATCCCAA ATCGGGCTCG
CCCTTCGTTC ACCTCGATAC CGGACATGTG CGGCACTGGC CGCGCATGAC CCACGACCAG
CTGGCGCGCG TCTTCCCGAA CGGCCGCACC GTGCATATTC CCTCCGATGG CAACCCCCTG
CCCGGCTATC AACTGGCGAT GGCCGACATC GAGAAGCGCG GCCAGAACGC GGATGAAGAC
GGGGCGGTGA ACAGCAAGCC GTCGAATTTC CTGCTGGCGC TATTCCGCGG CAAGTCCGCC
GACGAGGACG ATGAACCGGA TGGCGCGCCG GCTGCACGGC CGGCAAACCA GACCACGGTC
GCCTCCGCAG CACCGGCTGC GTCGGCCGAC CCGGTCCCGC TGCCCCGGGC GAAGCCGCCC
GCGGCCTTCA GGCTCGCATC CGCTGACGTC CTGACCGTTC CGGCCGCACA ACCCACCACG
AAACAGGCCG CGTCCGGCAA ACCCCAGACC CCGGCCGACA TCATCAATGC CCGCGGCTTC
TGGGATGAAA TCCCGTCGGC CCCGAAGCAG GCCACGCCGC AGCAGGTGAT CGCGGCGATC
AGCGCCCGCC AGGCACTCGC CAAAGCCGAC CCGCAACCGA CCTCCAGCAT CTCCGATACC
TTCCAGGCGC TGGCCTATGC GCCGCCACCG GCGAAGGACG TCCGCCGCGC ACGAATCGTC
GCGGCGACCG CATCGATCCC GCCCGTCCGG CGCGCCGCCC CCGCGCGCAA TCCGATGGCC
GTCGGCGGCG TGACCACCGT CGTCGCCAAA GGCGCACAGG GCCAGGGCAC GGTCGTGTCC
ACCTCGCGCC GACTGGCGCC AGCGGCCACG CGCGACAGCG ATGTCTGGAT GCGCGCGATG
ATCCTCGCCC CGAGCGCGAG CCGCACGATG TCGGCAACGG CCCTCGGCGA CCAGGACATG
ACGTTGATGC AGGTCTATTT CGAAAAGCCG GACCGGGCGA TCACAATGAC CTTCTCCGAC
AATCCGCAGA TGGGAATCGT CTGCAATCGA TTTACCGGAT CGGCTGTCGC CAGCCTGACC
ACGACGGCGC TCGCTAATTG A
 
Protein sequence
MLAGFARVLK SLSIPRAGYH IGLSSLLLLA GAGSVHDAAA LNETRTLSFH HTHSSEDLTV 
TFKRNGRYDE AALKQLNHFL RDWRSQEQTT MDRHLFDILW EVYRDVDARQ PINIVSAYRS
PATNAMLRRR SKHTGVARFS QHMLGHAMDF FIPGVPLEKI RFAGLRLQRG GVGFYPKSGS
PFVHLDTGHV RHWPRMTHDQ LARVFPNGRT VHIPSDGNPL PGYQLAMADI EKRGQNADED
GAVNSKPSNF LLALFRGKSA DEDDEPDGAP AARPANQTTV ASAAPAASAD PVPLPRAKPP
AAFRLASADV LTVPAAQPTT KQAASGKPQT PADIINARGF WDEIPSAPKQ ATPQQVIAAI
SARQALAKAD PQPTSSISDT FQALAYAPPP AKDVRRARIV AATASIPPVR RAAPARNPMA
VGGVTTVVAK GAQGQGTVVS TSRRLAPAAT RDSDVWMRAM ILAPSASRTM SATALGDQDM
TLMQVYFEKP DRAITMTFSD NPQMGIVCNR FTGSAVASLT TTALAN