Gene Nham_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1170 
Symbol 
ID4032628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1327076 
End bp1328206 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content59% 
IMG OID637969663 
Productfatty acid desaturase 
Protein accessionYP_576472 
Protein GI92116743 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGAAAAG GAGCAGGCCG CGCGAGCTGC GAAGCTGAGA ATTCAGCCCA CTTGGCGCGC 
GATCGGCAGG CTTCGGATAT CATCTTGAGC ATTGGACATA CCTCAGAACT GGCGACGCCC
GACACTCGGC GTTGGACGCG CATTCTGGGA AGCTATCGCA CGCCAAATCA CGTGCGCAGC
GTTGCCGAGT TGGTGATCAC GGCTTTGCCG CTCGTGACTT TATGGACGGC ATCTTGGTTC
ACGTTCTCCC TTGGCCATGC TTGGGCTTCA TTGCTTATCG CGATCCCAGC TGCTGGCTTT
CTCTTGCGCC TGTTCATGAT CCAGCACGAC TGCGGCCATG GCACTTTTTT CGCCGATCGT
CTGGCGAACG ACTGGGTCGG CCGCGTCATT GGCGTGCTCA CACTTACGCC TTACGACTGG
TGGCGCCGCA CGCATGCGAT CCATCATGCC ACCACCGGTA ACCTCGACCG GCGCGGTATC
GGCGACGTCG ATACCCTGAC AGTGCGCGAA TACCAGGCCC GTTCGTGGTG GGGCCGTCTG
AAATACCGAC TTTACCGTCA CCCGCTGGTC ATGTTCGTGG TCGGACCAGC CTATCTGTTT
CTCCTGCAAC ACCGTCTCCC GGTCGGCCTC ATGCGCGACG GTTGGCAGCC TTGGGCCAGC
ACAATGACAA CCAATCTCGC CATTGGCTTG ATCGTTGCCG CGCTCACGTG GTTCATCGGA
ATTAAGGCGT TCCTGCTCGT GCACCTTCCG ATCATACTGC TCGCCGCCAC CGCCGGCGTA
TGGCTGTTCT ATGTGCAACA TCAATTTGAG CAAACCGCGT GGGAGTGCGA CGAGCGGTGG
AATCTGCATC AGGCCGCCCT ATACGGCAGC TCACATTACG ATCTTCCGGT ATTGCTGCGC
TGGTTCACAG CCAACATCGG CATCCACCAC GTGCACCATC TTTGCAGTCG TATCCCCTTC
TACCGGCTGC CGCACGTGCT GCGCGACCAC CCTGAACTGC ACGAGGTCGG TCACATAACG
CTCCTGCAGA GCTTTCGGTG CGTAAGGCTT GTGCTGTGGG ACGAAGTGCA GCGCCGCCTG
GTATCGTTCC GCGAAATCAG ATGTAAACCG GCGCTGAACA AAGCCCCTTG A
 
Protein sequence
MRKGAGRASC EAENSAHLAR DRQASDIILS IGHTSELATP DTRRWTRILG SYRTPNHVRS 
VAELVITALP LVTLWTASWF TFSLGHAWAS LLIAIPAAGF LLRLFMIQHD CGHGTFFADR
LANDWVGRVI GVLTLTPYDW WRRTHAIHHA TTGNLDRRGI GDVDTLTVRE YQARSWWGRL
KYRLYRHPLV MFVVGPAYLF LLQHRLPVGL MRDGWQPWAS TMTTNLAIGL IVAALTWFIG
IKAFLLVHLP IILLAATAGV WLFYVQHQFE QTAWECDERW NLHQAALYGS SHYDLPVLLR
WFTANIGIHH VHHLCSRIPF YRLPHVLRDH PELHEVGHIT LLQSFRCVRL VLWDEVQRRL
VSFREIRCKP ALNKAP