Gene Nham_1132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1132 
Symbol 
ID4031582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1277591 
End bp1279036 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content66% 
IMG OID637969629 
Productlytic murein transglycosylase 
Protein accessionYP_576439 
Protein GI92116710 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02283] lytic murein transglycosylase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGCGA CGGTGGTGCA GATGCGGATG CGCGGAACAG GAATGGCGGC GGCAGTCGTG 
GTACTTGCGG CGCTCGTGCT GCCGGGCGAG ACGCGCGCGC AGACATCGAA CGGCGACCCC
ATTCAGGGCT TTCTCGATAA TCTCTTCACC GGTTCGCTCG CAAAAGGCGC ACAGAGCGCA
TCGGCGGCCC CGCACGGCGG ATCGGCGGCG CTTCAGCCTG CTCCGGCGCC CCGGCCCGCG
AGTTCGGCGT CGTCGTCCTG GAGCGGCGAG GATGGCGCAT CGGGTCATCC GCTGATGATG
GCGAGCGCGA TTCGTCAGGC CGCGGCAAAT TTCCCGAACT GTGTTGCGGC GATGTGGCCC
GACGCGGCAC GCCGTCACGT GACGCGCCAG AATTTCGAGC GCTTCACCGC GGGACTGTCG
CCCGATCTGC GCATCATGGA CCTGATGGAC TCGCAGCCAG AGTTCACCAA GGCGATCTGG
GATTATCTCG ATATTCTGGT CAACGATGCG CGGCTCGCGC GCGGCCGCGA AATCCTCGCG
ACCTACAAGC CGCAATTCGA CGCGGCCGAG AGGGCTTATG GCGTCGATCG TTATGCGATC
GCGGCGATCT GGGGCATCGA GTCGAACTAT TCGACCCGGA TGGGCGATCG CAGCGTGCTG
CAATCCACCG CGACGCTGGC CTGCGTCGGC CGCCGCCAGA AGTATTTCCG CGACGAGTTC
CTGGCGGCGC TTGAAATTCT CAATCGTGGC GACCTGCGAC CGGAGCAGAT GCGCGGCTCG
TGGGCGGGCG CGTTCGGCCC CACGCAATTC ATGCCGACGG CGTTCAAGCG CTTCGCGGTC
GATGGCGACG GCGACGGCCG CCGCGACGTG GTCGATGATC CCGCCGATCT GATCGCTTCC
ACCGCGAACA ATCTCAGAAA GGATGGTTGG CAGACCGGCA AGACCTGGGG TTACGAGGTC
GTGGTGCCCC AAAACTTCGA CTACATGCTG GCGGACCGCG CCAAGGCGAT GACGCTCGCG
CAGTGGGAGC ATCTCGGCAT CCGGCGCGCG GGCAACAAGA CCTTCCCGCA TCCCGCCGAC
CGCGCCTATC TGCTTGCGCC CGCCGGCGCC GACGGGCCGG GCTTCCTGAT GTTGCAGAAT
TTTCGGGTGT TCATGAAATA CAACCCGGCG GAGGCTTATG CGCTGGCGAT CGGCCACTTC
GCCGACCGGT TGCGCGGCGG GGCGCCGTTC GTCCAGTCCT GGCCACGGCA GGAACGAGTG
CTGTCCCGGG GCGAACGGCT GGAATTGCAG CAGCTTCTGG CCCGGCAAGG TTTCTATCGC
GGAACCCCCG ACGGCCAGAT CGGCAGCCTG ACCCGGAAGG CGCTGCGCGG CTTTCAGGCT
TCGAGCGGGG CGCCTGCCGA CGGATTTGCG TCGTCCGACG TGCTGGAACG GCTGCGGCGG
CGGTAA
 
Protein sequence
MVATVVQMRM RGTGMAAAVV VLAALVLPGE TRAQTSNGDP IQGFLDNLFT GSLAKGAQSA 
SAAPHGGSAA LQPAPAPRPA SSASSSWSGE DGASGHPLMM ASAIRQAAAN FPNCVAAMWP
DAARRHVTRQ NFERFTAGLS PDLRIMDLMD SQPEFTKAIW DYLDILVNDA RLARGREILA
TYKPQFDAAE RAYGVDRYAI AAIWGIESNY STRMGDRSVL QSTATLACVG RRQKYFRDEF
LAALEILNRG DLRPEQMRGS WAGAFGPTQF MPTAFKRFAV DGDGDGRRDV VDDPADLIAS
TANNLRKDGW QTGKTWGYEV VVPQNFDYML ADRAKAMTLA QWEHLGIRRA GNKTFPHPAD
RAYLLAPAGA DGPGFLMLQN FRVFMKYNPA EAYALAIGHF ADRLRGGAPF VQSWPRQERV
LSRGERLELQ QLLARQGFYR GTPDGQIGSL TRKALRGFQA SSGAPADGFA SSDVLERLRR
R