Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1132 |
Symbol | |
ID | 4031582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 1277591 |
End bp | 1279036 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637969629 |
Product | lytic murein transglycosylase |
Protein accession | YP_576439 |
Protein GI | 92116710 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTGCGA CGGTGGTGCA GATGCGGATG CGCGGAACAG GAATGGCGGC GGCAGTCGTG GTACTTGCGG CGCTCGTGCT GCCGGGCGAG ACGCGCGCGC AGACATCGAA CGGCGACCCC ATTCAGGGCT TTCTCGATAA TCTCTTCACC GGTTCGCTCG CAAAAGGCGC ACAGAGCGCA TCGGCGGCCC CGCACGGCGG ATCGGCGGCG CTTCAGCCTG CTCCGGCGCC CCGGCCCGCG AGTTCGGCGT CGTCGTCCTG GAGCGGCGAG GATGGCGCAT CGGGTCATCC GCTGATGATG GCGAGCGCGA TTCGTCAGGC CGCGGCAAAT TTCCCGAACT GTGTTGCGGC GATGTGGCCC GACGCGGCAC GCCGTCACGT GACGCGCCAG AATTTCGAGC GCTTCACCGC GGGACTGTCG CCCGATCTGC GCATCATGGA CCTGATGGAC TCGCAGCCAG AGTTCACCAA GGCGATCTGG GATTATCTCG ATATTCTGGT CAACGATGCG CGGCTCGCGC GCGGCCGCGA AATCCTCGCG ACCTACAAGC CGCAATTCGA CGCGGCCGAG AGGGCTTATG GCGTCGATCG TTATGCGATC GCGGCGATCT GGGGCATCGA GTCGAACTAT TCGACCCGGA TGGGCGATCG CAGCGTGCTG CAATCCACCG CGACGCTGGC CTGCGTCGGC CGCCGCCAGA AGTATTTCCG CGACGAGTTC CTGGCGGCGC TTGAAATTCT CAATCGTGGC GACCTGCGAC CGGAGCAGAT GCGCGGCTCG TGGGCGGGCG CGTTCGGCCC CACGCAATTC ATGCCGACGG CGTTCAAGCG CTTCGCGGTC GATGGCGACG GCGACGGCCG CCGCGACGTG GTCGATGATC CCGCCGATCT GATCGCTTCC ACCGCGAACA ATCTCAGAAA GGATGGTTGG CAGACCGGCA AGACCTGGGG TTACGAGGTC GTGGTGCCCC AAAACTTCGA CTACATGCTG GCGGACCGCG CCAAGGCGAT GACGCTCGCG CAGTGGGAGC ATCTCGGCAT CCGGCGCGCG GGCAACAAGA CCTTCCCGCA TCCCGCCGAC CGCGCCTATC TGCTTGCGCC CGCCGGCGCC GACGGGCCGG GCTTCCTGAT GTTGCAGAAT TTTCGGGTGT TCATGAAATA CAACCCGGCG GAGGCTTATG CGCTGGCGAT CGGCCACTTC GCCGACCGGT TGCGCGGCGG GGCGCCGTTC GTCCAGTCCT GGCCACGGCA GGAACGAGTG CTGTCCCGGG GCGAACGGCT GGAATTGCAG CAGCTTCTGG CCCGGCAAGG TTTCTATCGC GGAACCCCCG ACGGCCAGAT CGGCAGCCTG ACCCGGAAGG CGCTGCGCGG CTTTCAGGCT TCGAGCGGGG CGCCTGCCGA CGGATTTGCG TCGTCCGACG TGCTGGAACG GCTGCGGCGG CGGTAA
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Protein sequence | MVATVVQMRM RGTGMAAAVV VLAALVLPGE TRAQTSNGDP IQGFLDNLFT GSLAKGAQSA SAAPHGGSAA LQPAPAPRPA SSASSSWSGE DGASGHPLMM ASAIRQAAAN FPNCVAAMWP DAARRHVTRQ NFERFTAGLS PDLRIMDLMD SQPEFTKAIW DYLDILVNDA RLARGREILA TYKPQFDAAE RAYGVDRYAI AAIWGIESNY STRMGDRSVL QSTATLACVG RRQKYFRDEF LAALEILNRG DLRPEQMRGS WAGAFGPTQF MPTAFKRFAV DGDGDGRRDV VDDPADLIAS TANNLRKDGW QTGKTWGYEV VVPQNFDYML ADRAKAMTLA QWEHLGIRRA GNKTFPHPAD RAYLLAPAGA DGPGFLMLQN FRVFMKYNPA EAYALAIGHF ADRLRGGAPF VQSWPRQERV LSRGERLELQ QLLARQGFYR GTPDGQIGSL TRKALRGFQA SSGAPADGFA SSDVLERLRR R
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