| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1119 |
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| Symbol | |
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| ID | 4031569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1265834 |
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| End bp | 1267423 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637969616 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_576426 |
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| Protein GI | 92116697 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.480596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAAC CGAAAGTTCT GATTTCCGAT GCGCTCAGCC CTGCCGCCGT GCAGATCTTC
AAGGATCGCG GCATCGAGGT CGATTTCCAG CCCGCGCTCG GCAAGGACAA GGACAAGCTC
GCCGAGATCA TCGGCAACTA CGACGGCCTT GCGATCCGTT CGGCCACCAA GGCCACCGCG
AAAATTCTCG CCAATGCCAA AAAGCTGAAG GTGATCGGCC GCGCCGGTAT CGGCGTCGAC
AACGTCGAGA TTCCGGCCGC GACCGCCAAG GGCATCATCG TGATGAACAC GCCGTTCGGC
AATTCGATCA CGACCGCCGA ACATGCGATC ACCTTGATGT TGGCGCTGGC GCGCGAAATT
CCCGCCGCCG ATGCCTCGAC CCAGGCCGGC AAGTGGGAGA AGAACCGCTT CATGGGTGTC
GAGATCACCA ACAAGATTCT CGGCATCATC GGTTGCGGCA ACATCGGCTC GATTGTCGCG
GACCGCGCGC TCGGCCTGAA GATGAAGGTG ATCGCGTTCG ATCCATTCCT GTCGCCGGAG
CGCGCCAAGG ATCTCGGCGT TGACAAGGTC GAGCTTGAAG ACCTGTTCAA GCGCGCCGAT
TTCATCACGC TGCATACGCC ATTGACCGAC AAGACCCGCA ACATCATCGA CGCTGCCGCC
ATCGCCAAGA TGAAGAAGGG CGTGCGCATC ATCAACTGCG CGCGCGGTGG CCTGGTTGAC
GAGCAGGCGC TGGCCGATGC GCTCAATGCC AAGCATGTCG CGGGTGCGGC GTTCGACGTG
TTTGTCGAGG AGCCGGCGAC CAAGAACGTG CTGTTCGGTC ACCCCAACGT GATCTGCACG
CCGCATCTTG GCGCCTCCAC CTCGGAAGCT CAGGAGAACG TCGCGCTGCA GGTCGCCGAG
CAGATGTCGG ACTATCTGCT CACCGGTGCG ATCACCAACG CGCTCAACTT CCCCTCGATC
ACGGCGGAAG AAGCACCGAA GCTGAAGCCG TTCGTCGAGC TTGCGGAAAA GCTCGGCTCG
TTCGCCGGTC AGCTTACGGA GACCGGCATC TCCAAGGTGA TCATCACCTA TGAGGGGCAG
GTCGCCGAAA TGAAGATCAA GGCACTGACC TCGGCGGCGC TGTCGGGCCT GCTGCGGCCG
ATGCTGGGCG ACGTCAACGT CGTGTCCGCG CCGGTCGTCG CCAAGGAGCG CGGCATGGTG
GTGGACGAGG TGGTGCGCGC CGCGCAGAGC GACCACGAAA GCCTGATCAC GGTGACGGTC
GCCACCGAGC GGCAGAAGCG TTCGGTGTCC GGCACGGTCT ATGCCGACGG CAAGCCGCGC
CTTGTCGACA TCAAGGGCAT CCGTGTCGAT GCCGAGTTCG GCAAGTCGAT GATCTACGTC
ACCAACGAGG ACAAACCCGG CTTCATCGGC AAATTCGCGT CGCTGCTCGG CGACGCGGGC
GTCAACATCG CGACCTTCAA TCTCGGCCGT CACGGTCAGG GTGGCGATGC CATCGCGCTG
GTCGAGGTTG ACGGCAACGT GCCGGAGAAC GTTCTCGCGA AGGTGCAGGC GCTGCCGCAG
GTCAAGCAGG TGAAGGCGCT GACGTTCTGA
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| Protein sequence | MTKPKVLISD ALSPAAVQIF KDRGIEVDFQ PALGKDKDKL AEIIGNYDGL AIRSATKATA
KILANAKKLK VIGRAGIGVD NVEIPAATAK GIIVMNTPFG NSITTAEHAI TLMLALAREI
PAADASTQAG KWEKNRFMGV EITNKILGII GCGNIGSIVA DRALGLKMKV IAFDPFLSPE
RAKDLGVDKV ELEDLFKRAD FITLHTPLTD KTRNIIDAAA IAKMKKGVRI INCARGGLVD
EQALADALNA KHVAGAAFDV FVEEPATKNV LFGHPNVICT PHLGASTSEA QENVALQVAE
QMSDYLLTGA ITNALNFPSI TAEEAPKLKP FVELAEKLGS FAGQLTETGI SKVIITYEGQ
VAEMKIKALT SAALSGLLRP MLGDVNVVSA PVVAKERGMV VDEVVRAAQS DHESLITVTV
ATERQKRSVS GTVYADGKPR LVDIKGIRVD AEFGKSMIYV TNEDKPGFIG KFASLLGDAG
VNIATFNLGR HGQGGDAIAL VEVDGNVPEN VLAKVQALPQ VKQVKALTF
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