Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1085 |
Symbol | fadE |
ID | 4031613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 1223881 |
End bp | 1226151 |
Gene Length | 2271 bp |
Protein Length | 756 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637969583 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_576393 |
Protein GI | 92116664 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTTC GCCGTGACGT GATCTCCAAG CTGATCTTCT CCTGGGCGCG CCGCGTGCTG CCGTCGATGT CGGATACCGA GCGCGAGGCG CTGGAGGCCG GCGACGTCTG GTGGGACGCC GATCTGTTCA CCGGCAATCC CGACTGGACG AAGCTGCTGG CGACCTCGCC GGCGACTTTG ACCGCGGAGG AAGAGGCGTT CCTCAACGGC CCGGTGGACG AACTCTGCGC CATGCTCGAC GACTGGAAGA TCAATTGGGA ATGGCGCGAC CTGCCGCCCG AGGTCTGGAG TTTCATCAAG CAGAAAAAAT TCTTCGGCAT GATCATTCCG ACCGAGTACG GCGGACTCGG CTTCTCGCCC TATGCGCATT CGGAAGTGGT GCGCAAGATT TCGTCGCGCT CGCTGACCGC CGCAGTCACG GTGATGGTGC CGAATTCGCT CGGCCCCGGC GAATTGCTGA TGCGCTTCGG CACCAGGGAT CAGCAGGGAA AATGGCTGCC GCGCCTCGCC GACGGCCGCG ACGTTCCGTG CTTCGGCCTG ACCAGTCCGG AAGCCGGCTC CGACGCCGCG GCGATGGTCG ACAGCGGCAT CATCTGCAAG GGCATGTTCG AGGGCCGCGA GGTGATCGGG CTCAGGCTCA ACTGGCACAA GCGCTACATC ACGCTCGGCC CGGTGGCGAC GCTGCTCGGC CTCGCTTTCA AGGCCTACGA TTCGGATCAT CTGGTCGGCT CGCAGGAGGA CCTCGGCATC ACCGTGGCGC TGATCCCGAC CGATCTGCCG GGGGTGTCGA TCGGCCGGCG CCATCTGCCG GCGATGCAGG TGTTCCAGAA CGGTCCGAAC TGGGGCAAGG ACGTCTTCAT CCCGCTCGAC TACGTCATCG GTGGAAGGGA GCGTCTGGGT CAGGGCTGGA AGATGCTGAT GACGGCGCTG GCGGCCGGGC GCGGCATCTC GCTGCCCTCG TTGTCGGCGG CGGGCGCGGC CTTCGCGGCG CGCACCACCG GCGCCTATGC CCGCGTCCGC GAGCAGTTCG GCATTCCGAT CGGCAAGTTC GAGGGCATCG AGGAGCCGTT GGCGCGGATC GCCGCAACCG CCTATCTGAT CGACGCGGCG CGGCGGCTGA CCTGCGCCGC GCTCAACGAG GGCCACCATC CCGCCGTCAT TTCCGGCATC ATGAAGCTGC ACGCCACCGA GCGCTTGCGC ACCGTGATCG ATGACGCCAT GGACATCCAC GGCGGCAAGG CCGTGATCGA CGGACCGCAA AACTACATCG GCAATCTCTA TCGCGGGGTG CCGGTCTCGA TCACGGTGGA AGGCGCCAAC ATTTTGACGC GCAACCTCAT CATCTTCGGG CAGGGCGCGA TCCGCGCGCA TCCCTTTCTG CTGCAGGAGA TGAATGCGCT CGGCGACGCC GACAAACTCC GGGGCCTCGA TACCTTCGAC AAGGCGTTCT GGGCTCATAT CTCCCACAGC TTCACCACGC TGTTCCGCGC TTGGGGCCGA AGCTGGAGCG GCGGGGTGTT CGCGCCCGCG CCGGATGATG CGGGCGCGGT GACCGGCTTC TACCGTCAGC TCTCGCGCTA TTCGTCGGCC TTCGCATTGT GCGCCGACAT GGCGCTCCTG ACGCTCGGCG GCAAGCTGAA GCGCAAGGAG ATGCTGTCGG CGCGGTTCGG CGATATTCTC TCCGAATTGT ATCTGTTGTC GGCCGTCATC AAGCGCTGGC ACGACGATGG CCGTCAGGAG GTCGATCTCC CGATGGTCGA ATGGTGCATG GCCACTGGCT TCCGCACCAT CGAGCAGCGG TTTGCTGATA TCCTGGCGAA CCTGCCGAAC CGCTTCGTCG CGCTCATGCT CAAATTCATG ATCCAGCCGC TGGGCGCGCA GGCGCGCGGG CCGAGCGACG CGGTCGTCCA TGCCTGCGCG CAACTGGTGC TGGAGCCCTC TGTCGCGCGT GACCGCCTGA CGTCGGGGCT CTCGCAGGTC GATGATGGCA GTAGCCCGGC GCTGCTGGAA AAGGCGTTTC TGCTGGTGAC TGCCGCGGAG GACGTGTTCA GGCGGATGCG CGCGGCGCGA CTGCACGACG CAGACGAGGC GGTGAAGCAG GGCGTCATCA CCCAGGTCGA AGCCGAGCAA TACAAGGCGG CGCACGAGGC GGTGGTCCGC GTCATCGAGG TCGACGACTT CGCGCCGGAG GCATTGTCCC CGATTTACAA GAAGCCCGCC GGCGTGCATC AGGTCGTGCA GGAGTTGAGT GAGACGAGGG CGGTAGGCTG A
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Protein sequence | MSFRRDVISK LIFSWARRVL PSMSDTEREA LEAGDVWWDA DLFTGNPDWT KLLATSPATL TAEEEAFLNG PVDELCAMLD DWKINWEWRD LPPEVWSFIK QKKFFGMIIP TEYGGLGFSP YAHSEVVRKI SSRSLTAAVT VMVPNSLGPG ELLMRFGTRD QQGKWLPRLA DGRDVPCFGL TSPEAGSDAA AMVDSGIICK GMFEGREVIG LRLNWHKRYI TLGPVATLLG LAFKAYDSDH LVGSQEDLGI TVALIPTDLP GVSIGRRHLP AMQVFQNGPN WGKDVFIPLD YVIGGRERLG QGWKMLMTAL AAGRGISLPS LSAAGAAFAA RTTGAYARVR EQFGIPIGKF EGIEEPLARI AATAYLIDAA RRLTCAALNE GHHPAVISGI MKLHATERLR TVIDDAMDIH GGKAVIDGPQ NYIGNLYRGV PVSITVEGAN ILTRNLIIFG QGAIRAHPFL LQEMNALGDA DKLRGLDTFD KAFWAHISHS FTTLFRAWGR SWSGGVFAPA PDDAGAVTGF YRQLSRYSSA FALCADMALL TLGGKLKRKE MLSARFGDIL SELYLLSAVI KRWHDDGRQE VDLPMVEWCM ATGFRTIEQR FADILANLPN RFVALMLKFM IQPLGAQARG PSDAVVHACA QLVLEPSVAR DRLTSGLSQV DDGSSPALLE KAFLLVTAAE DVFRRMRAAR LHDADEAVKQ GVITQVEAEQ YKAAHEAVVR VIEVDDFAPE ALSPIYKKPA GVHQVVQELS ETRAVG
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