Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1078 |
Symbol | |
ID | 4031606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 1212857 |
End bp | 1213624 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637969576 |
Product | rhodanese-like protein |
Protein accession | YP_576386 |
Protein GI | 92116657 |
COG category | [R] General function prediction only |
COG ID | [COG1054] Predicted sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0473759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAAGG TCGCCGCTCT GTACCAATTT GCACCGCTGC CGGATTTTCG CGAGGTGCGC GAGCCGCTGC GCGCGCTTTG CGTCGGGCTT TCCGTCAAGG GCACGATCCT GCTCGCCGGA GAAGGCATCA ACGGCACCGT CGCCGGAATG CCGGACGCCA TCGACGCGCT GGCCGCGGAG TTGCAAACCG GCACGCTGTT CTCCGGACGG CTCGACAATC TCGAGCTGAA ATTCTCGCAG GCATCCGTGA TGCCGTTCGC GCGGCTGAAG GTCCGGCTCA AGAAGGAGAT CGTGACGCTC GGCGATCCCG CAACCGATCC GACCCGCGCG GTCGGCATCT ATGTCGAACC GAAGGACTGG AACGGCCTGA TCGCCGCGCC CGACACGCTT CTCATCGATA CCCGCAATGC CTTCGAGGTG GCGATGGGCA CCTTCGAAGG CGCCGTCGAT CCGCAACTCG CGCGGTTCGG CGAGTTCAAG GATTTCGTCG CGCAAAAGCT CGATCCGGAC AGGCATCGCA GGATCGCAAT GTTCTGCACC GGCGGGATTC GCTGCGAAAA GGCCAGCTCC TATCTGTTGT CGCGCGGCTT CAAGGAGGTC TATCACCTCA AGGGCGGCAT CCTGAAATAC CTCGAAGGCA TTCCCGAGAG CGAAAGCTGC TGGCGCGGCG AATGTTTTGT GTTCGACGAC CGGATCGCGC TCGGTCACGG GTTGACGGAA TCCAGACGCG CGGGCCGGCT CATGGACGGA GCGCCCGGCG ATGACTGA
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Protein sequence | MLKVAALYQF APLPDFREVR EPLRALCVGL SVKGTILLAG EGINGTVAGM PDAIDALAAE LQTGTLFSGR LDNLELKFSQ ASVMPFARLK VRLKKEIVTL GDPATDPTRA VGIYVEPKDW NGLIAAPDTL LIDTRNAFEV AMGTFEGAVD PQLARFGEFK DFVAQKLDPD RHRRIAMFCT GGIRCEKASS YLLSRGFKEV YHLKGGILKY LEGIPESESC WRGECFVFDD RIALGHGLTE SRRAGRLMDG APGDD
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