Gene Nham_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1078 
Symbol 
ID4031606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1212857 
End bp1213624 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content63% 
IMG OID637969576 
Productrhodanese-like protein 
Protein accessionYP_576386 
Protein GI92116657 
COG category[R] General function prediction only 
COG ID[COG1054] Predicted sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0473759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAAGG TCGCCGCTCT GTACCAATTT GCACCGCTGC CGGATTTTCG CGAGGTGCGC 
GAGCCGCTGC GCGCGCTTTG CGTCGGGCTT TCCGTCAAGG GCACGATCCT GCTCGCCGGA
GAAGGCATCA ACGGCACCGT CGCCGGAATG CCGGACGCCA TCGACGCGCT GGCCGCGGAG
TTGCAAACCG GCACGCTGTT CTCCGGACGG CTCGACAATC TCGAGCTGAA ATTCTCGCAG
GCATCCGTGA TGCCGTTCGC GCGGCTGAAG GTCCGGCTCA AGAAGGAGAT CGTGACGCTC
GGCGATCCCG CAACCGATCC GACCCGCGCG GTCGGCATCT ATGTCGAACC GAAGGACTGG
AACGGCCTGA TCGCCGCGCC CGACACGCTT CTCATCGATA CCCGCAATGC CTTCGAGGTG
GCGATGGGCA CCTTCGAAGG CGCCGTCGAT CCGCAACTCG CGCGGTTCGG CGAGTTCAAG
GATTTCGTCG CGCAAAAGCT CGATCCGGAC AGGCATCGCA GGATCGCAAT GTTCTGCACC
GGCGGGATTC GCTGCGAAAA GGCCAGCTCC TATCTGTTGT CGCGCGGCTT CAAGGAGGTC
TATCACCTCA AGGGCGGCAT CCTGAAATAC CTCGAAGGCA TTCCCGAGAG CGAAAGCTGC
TGGCGCGGCG AATGTTTTGT GTTCGACGAC CGGATCGCGC TCGGTCACGG GTTGACGGAA
TCCAGACGCG CGGGCCGGCT CATGGACGGA GCGCCCGGCG ATGACTGA
 
Protein sequence
MLKVAALYQF APLPDFREVR EPLRALCVGL SVKGTILLAG EGINGTVAGM PDAIDALAAE 
LQTGTLFSGR LDNLELKFSQ ASVMPFARLK VRLKKEIVTL GDPATDPTRA VGIYVEPKDW
NGLIAAPDTL LIDTRNAFEV AMGTFEGAVD PQLARFGEFK DFVAQKLDPD RHRRIAMFCT
GGIRCEKASS YLLSRGFKEV YHLKGGILKY LEGIPESESC WRGECFVFDD RIALGHGLTE
SRRAGRLMDG APGDD