| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1004 |
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| Symbol | |
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| ID | 4031687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 1119344 |
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| End bp | 1120213 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637969503 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_576313 |
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| Protein GI | 92116584 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.838734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAAC TTCCCGAAGT CGAAACCGTT CGCCGCGGCC TGCAGCCGGT GATGGAGGGC
GCGCGTATCA CGCGCGTCGA ACTGCGCCGC GCCGACCTGC GTTTCCCGTT TCAACCCGAC
TTTGCCGCGC GTCTGACTGG ACAGCGCATC GTCGGCCTCG GTCGGCGGGC AAAATTCCTG
ATGGCCGACC TTGCCTCGGG CGACGTGCTG ATGATGCATC TCGGGATGTC GGGTTCGTTC
CGCATCGGTG CCGTACCAGT CGGCGCGTTT CACCATCCCC GCAATGTAGA GCGCGTCAAC
GACCATGTCG TGCTACGGCT GAGCAGCGGC AAGATCATCA CCTACAACGA TCCGCGCCGG
TTTGGCTTTA TGAAGATCGT CGCCCGCTCC GCGCTCGACG ACGAGCCGCT GCTCAAGGGG
CTCGGTCCCG AACCGCTCGG CAACGCCTTC GATGCTGCCA CCTTGGCAAA GGCCTGCGCC
GGCAAGACCG CCAGCCTCAA GGCGGCGCTA CTCAACCAGC ATGTCGTCGC CGGGCTCGGG
AACATCTATG CCGCCGAGAC GCTGCACCGC GCCCGGTTGT CGCCTAAACG CCGCGCCTCG
ACGCTGGCCA GCCACAGCGG CGCACCGACT GACCGCGCCA GACAATTGGT CGCGGCGATC
CGCGCCGTGC TCACCGAGGC CATCGCGGTT GGCGGCGCGA CGCTACGCAA CTGTCGCCAC
CCGGACGGCA AGCTCGGCTA TTTCCAGCAC TCGTTCGAAG TCTATAATCA CGAAGGCCAG
CCTTGCACGA CACCCGGCTG CGACGGCGTG GTGCGCCGTT TCGTGCAGAA CGGCCGGGCC
ACCTTCTGGT GCCCGAAATG TCAGAAGTAA
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| Protein sequence | MPELPEVETV RRGLQPVMEG ARITRVELRR ADLRFPFQPD FAARLTGQRI VGLGRRAKFL
MADLASGDVL MMHLGMSGSF RIGAVPVGAF HHPRNVERVN DHVVLRLSSG KIITYNDPRR
FGFMKIVARS ALDDEPLLKG LGPEPLGNAF DAATLAKACA GKTASLKAAL LNQHVVAGLG
NIYAAETLHR ARLSPKRRAS TLASHSGAPT DRARQLVAAI RAVLTEAIAV GGATLRNCRH
PDGKLGYFQH SFEVYNHEGQ PCTTPGCDGV VRRFVQNGRA TFWCPKCQK
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