| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0959 |
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| Symbol | |
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| ID | 4031797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 1062152 |
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| End bp | 1062784 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637969462 |
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| Product | autoinducer synthesis protein |
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| Protein accession | YP_576272 |
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| Protein GI | 92116543 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0369652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCACA TCGTCACGGC GGAAAATATC GGTGCGTACC AGTACGAGAT GGAGCAGGCT
TATCGATTGC GTCACAATGT CTTTGTTGAC GAAATGGGAT GGGAGGATAT GCGGAAGCCT
GATGGCCGGG AGATCGACCA GTTTGACGAC GGCCGCGCAA TCCACATGCT CCACGTCGAC
GAGGGTCGCG TCCTGGGATA TCAAAGAATG CTACCCACGA TGCGCCCTCA CCTCCTCACC
GAGGTGTTGC CCAACCTGTG TGAAGGCGAT TTCCCTGTAG GGCCGCATGT TTGGGAGTGG
ACACGCTATT GCGTGACGTG TGAACATCGC GATCGTGGGC GTATTCTGAG TCCGGCCGGC
AACCTTCTTT TGTCATCCAT TGTCGAATGG GGCCTGGCGA ATAGCGTCAA AAAAATCGTC
ATCGAGATGA ATCCGTTGTG GCTGCTTCGC TTGGTGCAAT TGCACTTCCG CGTGACGTCC
CTTGGTTTAC CCCAACAGAT CGGGGAGGAC TCCATTGTCG CCGTTACCGC GGCGTTCGAC
CGACGTACAC TTAGAAAGCT GCAAGAGATG CGTGGCAATG ACCTCCCGGC CATTGTGACC
CAACCGGAAG CCGACCGGCG GTCGCTCGCT TAG
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| Protein sequence | MIHIVTAENI GAYQYEMEQA YRLRHNVFVD EMGWEDMRKP DGREIDQFDD GRAIHMLHVD
EGRVLGYQRM LPTMRPHLLT EVLPNLCEGD FPVGPHVWEW TRYCVTCEHR DRGRILSPAG
NLLLSSIVEW GLANSVKKIV IEMNPLWLLR LVQLHFRVTS LGLPQQIGED SIVAVTAAFD
RRTLRKLQEM RGNDLPAIVT QPEADRRSLA
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