Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0947 |
Symbol | |
ID | 4031766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 1046204 |
End bp | 1047868 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637969453 |
Product | hypothetical protein |
Protein accession | YP_576263 |
Protein GI | 92116534 |
COG category | [R] General function prediction only [S] Function unknown |
COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases [COG3453] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01244] conserved hypothetical protein TIGR01244 |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGTGA AGAAATTATC CGATGAGCTG AGCGTATCGG CACAGATTAT GCCGCACGAT ATGGCCGCGC TGAAGCAGGC CGGTTTCCGT TCGATCATCT GCAATCGACC AGACGGCGAG GCCGCCGATC AACCAACGGC TCGGGAATTG GAAGCGGCAG CGTCCGCCCG TGAGCTTGAG TTCGTCTATC TGCCGGTTGT TTCCGGCAAG ATGTCCGATA GCGACGCCGT GAAATTTGGG CAGATATTGA AGAACCTGCC GAAACCGGCC TTGGCATTCT GCCGTACCGG AACACGGTCC ACGTCACTTT GGTGTTTGGC GAATGCATCT ACGCAACCCC TTCCGGCACT TCTCGGAGCG GCCAAAGCAG CCGGCTACGA TATGTCTGGC ATCGTGCGGA GGATTGCCAA TGGCGGCAAG ACCCCGGTGC ACCTGGCAGA CGCAAGCTAT GACGCCGTCA TTGTCGGCGG CGGCGCCGCT GGCATCGCCT GCGCGTCGAG CCTCCTGGCG CGCGCGCCCA ACCTCAACAT CGCCATCATC GATCCTGCCG ATATTCACTA TTACCAACCC GGATGGACCA TGGTCGGAGC CGGTGTCTTC GACGCAGCGT CCACCGTCCA TACGATGGCG TCGGTCGTGC CCTCGGGCGT GACCTGGATC AAGGCTGCCG TCACCGCGTT CGAGCCGACC GAGAACGCTG TCATTCTGGA AGGATGTCGC GTCGTCAAGT ATAGCCGCCT CGTCGTCTGT CCCGGTCTGA AGCTCGATTG GTCGAAGGTT GATGGGTTAA CCGAAACGCT CGGTCGCAAC GGCGTGACCT CCAACTATCG CTTCGACCTT GCGCCCTATA CCTGGGAACT TGTCCGTTCA CTGAAATCCG GAAAGGCTGT CTTCACGCAG CCGCCGATGC CGATCAAGTG CGCGGGCGCG CCGCAGAAGG CGATGTATCT GTCGGCGGAT CATTGGTATC GCCGTGGCCA CCTCCGCAAC ATCGATGTCG GATTCTATAA CGCCGGTAGC GTGCTATTCG GCGTCGCCGA TTACGTGCCT GCCTTGATGG AATACGTAAA GAAGTATGAT GCGAAGCTGA ATTTCCAACA CAATCTCGTC GCCATCGACG GGCCGGAAAG GAAGGCCTAC TTCACCAAAA CCTCTCCTGA TCGTCCGGCG GAGACCGTCG AAGTGCAATT CGACATGATC CACGTGACGC CGCCGCAGTG CGCGCCGGAC TTCATCCGTG TCAGCGCGCT GGCGGACGTA TCCGGATGGG TCGACGTGGA CCAGGGAAGC CTGCGGCACA AGACATACGA CAACATCTGG TCTCTGGGCG ATGTATGCTC GGCCCCGAAT GCCAAGACTG CCGCGGCGGC CCGCAAGCAG GCGCCGATCG TTGCCGAGAA TATATGCGTC GATTTGCGTC TCCGAGCGAA ACAGGCGGTG TATGATGGTT ATGGATCGTG TCCGTTAACC GTCGAGCGCG GCAAGATTGT TCTGGCCGAG TTTGGATATG GCGGAAAGCT TCTGCCGAGC TTCCCTGCCT TCATCCTGAA CGGTAAGAAG CCGACCCGAG CGGCCTGGTG GCTGAAGCAG AGAGTCCTGC CGCCGATCTA TTGGCATGCG ATGCTCAAGG GCAAAGAGTG GATGGCCGCT CCAGACGTGC GCTGA
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Protein sequence | MDVKKLSDEL SVSAQIMPHD MAALKQAGFR SIICNRPDGE AADQPTAREL EAAASARELE FVYLPVVSGK MSDSDAVKFG QILKNLPKPA LAFCRTGTRS TSLWCLANAS TQPLPALLGA AKAAGYDMSG IVRRIANGGK TPVHLADASY DAVIVGGGAA GIACASSLLA RAPNLNIAII DPADIHYYQP GWTMVGAGVF DAASTVHTMA SVVPSGVTWI KAAVTAFEPT ENAVILEGCR VVKYSRLVVC PGLKLDWSKV DGLTETLGRN GVTSNYRFDL APYTWELVRS LKSGKAVFTQ PPMPIKCAGA PQKAMYLSAD HWYRRGHLRN IDVGFYNAGS VLFGVADYVP ALMEYVKKYD AKLNFQHNLV AIDGPERKAY FTKTSPDRPA ETVEVQFDMI HVTPPQCAPD FIRVSALADV SGWVDVDQGS LRHKTYDNIW SLGDVCSAPN AKTAAAARKQ APIVAENICV DLRLRAKQAV YDGYGSCPLT VERGKIVLAE FGYGGKLLPS FPAFILNGKK PTRAAWWLKQ RVLPPIYWHA MLKGKEWMAA PDVR
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