| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0932 |
|---|
| Symbol | |
|---|
| ID | 4031926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 1026312 |
|---|
| End bp | 1027388 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637969439 |
|---|
| Product | ferredoxin |
|---|
| Protein accession | YP_576249 |
|---|
| Protein GI | 92116520 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
|---|
| TIGRFAM ID | [TIGR02160] phenylacetate-CoA oxygenase/reductase, PaaK subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGCT TCCACACCTT GAAAGTCACG GATGTGCGGC GCGAGACGCG CGATGCCGTC
GTGGTAACGC TGGTGCCGCG TGCGGAAGAC AGCGCCCTGT TCGCGTTCAC GCACGGCCAG
TACCTGACTT TCCGCCGCAA CTTCGACGGT GATGAACTGC GCCGTTCCTA TTCGATCTGC
GCCGGGTGTG ACGAAGGTGT TCTTAAGGTC GGCATCAAGC GCGTCGATGG CGGCACGTTC
TCGACGTGGG CGAATGAGGC CCTTGCAGCC GGCGACGAGA TCGAAGCCAT GCCGCCTATG
GGAAAGTTCT TCACGCCGAT CGAACCGGAT GCGCGGAGGA ACTACATTGG CTTCGCCGGC
GGCTCGGGCA TCACGCCGGT GCTCTCCATC ATCAAGACCG TGCTCGTCCG GGAGCCTCAC
GCGAGCTTCA CGCTCGTCTA CGCCAACCGC CAGATCAGCA CGATCATGTT CCGCGAGGAA
CTGGAAGACC TGAAAAACCA GCATCTCGGC AGGTTCGCCA TTATTCATGT TCTTGAAGGT
GAAGCGCAAG ACATCGATCT CTTCACCGGC CGCATTGACG GCGACAAGGT GGAGGCCCTG
TTCACGCACT GGATCGATTC CAACGCGGTC GACATGGCTT TCATCTGCGG CCCCGAGCCG
ATGATGCTGG CGATTGCCGC GGCGCTGCGC GAGCACGGGT TGAACGACAC GCAGATCAAG
TTCGAGCTGT TTGCCTCCGG CCAGCCGGGC CGGGCCAAGG TCAAGGCCGT GTCCAGGACG
GCCGTCGTAT CCGGCACTGG GGTTGAAGCG ACGGTGACAC TGGATGGCGC GACCCGCAGC
TTCATCATGC CGCGCGAGAG CAAGAGCGTG CTCGATGCAG CGCTCGCCGC CAATATGGAT
GCTCCCTACT CCTGCAAAGC TGGGGTGTGC TCGACCTGTC GCTGCAAGGT GCTTGAAGGC
GAAGTGGAAA TGGCGGTGAA CCATGCGCTG GAGGATTACG AGGTGCGCGC CGGCTATGCG
CTGAGCTGTC AGGCGTTTCC ACTGACCGAC CGCCTCGTCG TGACCTACGA CGAATAG
|
|---|
| Protein sequence | MARFHTLKVT DVRRETRDAV VVTLVPRAED SALFAFTHGQ YLTFRRNFDG DELRRSYSIC
AGCDEGVLKV GIKRVDGGTF STWANEALAA GDEIEAMPPM GKFFTPIEPD ARRNYIGFAG
GSGITPVLSI IKTVLVREPH ASFTLVYANR QISTIMFREE LEDLKNQHLG RFAIIHVLEG
EAQDIDLFTG RIDGDKVEAL FTHWIDSNAV DMAFICGPEP MMLAIAAALR EHGLNDTQIK
FELFASGQPG RAKVKAVSRT AVVSGTGVEA TVTLDGATRS FIMPRESKSV LDAALAANMD
APYSCKAGVC STCRCKVLEG EVEMAVNHAL EDYEVRAGYA LSCQAFPLTD RLVVTYDE
|
|---|
| |