Gene Nham_0922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0922 
Symbol 
ID4031916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1018824 
End bp1019780 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content56% 
IMG OID637969430 
Productbeta-lactamase-like 
Protein accessionYP_576240 
Protein GI92116511 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCCA AGGGTTTCGC TTCCACGACC GATATGGCGG AGAAGAAAAT CACATTCTCC 
GAAATCGGGC CCGACATCTA TGCGTTCACC GCGGAGGGCG ATCCAAATAC GGCGGTTATT
GTCGGCGATG ACGGCTGCAT TGTGTTTGAC GCACAGGCGA CGCCCGCAAT GGCGAACGGC
GTCATCGAAC GCATCAGAAC CGTAACCGAC AAACCCATCA AGTATGTGGT TCTATCGCAT
TATCATGCGG TGCGCGTGCT CGGCGCTTCT GCATATCACG CGCAGGGGAT CGTCGCTTCG
AAAGAAACCC ACAGGCTGAT CGAAGAGCGC GGCCAACAGG ATTGGGATTC CGAATTCGGA
CGATTTCCGC GGCTATTCCG TGATGCTGCA AGCATCCCGG GGCTGACTTG GCCGACACTG
ACGTTCGAGA CCGAGATGAC AATCGATCTC GGCAAGCGCG CGGTGAGGCT GATGCATTTG
GGTGCCGGCC ACACATCCGG AGATATCGTG GCATGGGTCC CCGACGCGCA GGTGATGTGC
TCAGGCGATC TGATCGAATA CCATTCCGCT TGCTATTGCG GAGATGCTTA TTTGCACGAA
TGGCCGATGA CATTGAATGA AATTCGCAAA TTCAATCCCA AAGCAGTCGC TCCCGGCCGC
GGTAACGCTC TCAAGGGGCA GTCCATTACA CGAGAGGCAA TTGCGATGAC GCGTGATTTC
GTCACTGCAT TGTATGGCTC GGCGGAATTG TCTGTTGCCA AAGGGCACAA CCTGAAGGAA
ACGGTTGCCG CGGCACGCGA AGTCATGGAC CCGAAATTCT CGAGCTTCGC CATTTATGAA
CACTGCCTAC CGTTCAACGT CTCCCGGGCT TTCGATGAGG CGTCGGGCAT CGACAATCCG
GTGATTTGGA CCGCGGACCG TGACCGCGAG ATGTGGGCGA CCATTCAAGG AGGATAA
 
Protein sequence
MSAKGFASTT DMAEKKITFS EIGPDIYAFT AEGDPNTAVI VGDDGCIVFD AQATPAMANG 
VIERIRTVTD KPIKYVVLSH YHAVRVLGAS AYHAQGIVAS KETHRLIEER GQQDWDSEFG
RFPRLFRDAA SIPGLTWPTL TFETEMTIDL GKRAVRLMHL GAGHTSGDIV AWVPDAQVMC
SGDLIEYHSA CYCGDAYLHE WPMTLNEIRK FNPKAVAPGR GNALKGQSIT REAIAMTRDF
VTALYGSAEL SVAKGHNLKE TVAAAREVMD PKFSSFAIYE HCLPFNVSRA FDEASGIDNP
VIWTADRDRE MWATIQGG